| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2606 |
|---|
| Symbol | |
|---|
| ID | 6162895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 2856691 |
|---|
| End bp | 2857650 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641665382 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001791636 |
|---|
| Protein GI | 171059287 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.604318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCCC GAACTGCTGA TCACCTTTTC TGGATGTCGC GCTACATGGA GCGGGCGGAA
AACACCGCGC GCATGCTCGA TGTCAACTAC CAGACCTCGC TGCTGCCGCA GTCGGCCGCC
GTCACCGAAC AAGGTTGGCG CGGCCTGCTG AGCATCTCCG AGCTGAGCGG CGACTACGCC
ACCCGCTACG GCGAGATCGA TGCCCGCAAG GTGATGGACT TCATGCTGCG CGACGAGCGC
AACCCGTCGT CGATCCTCTG CTGCCTGCGC GCGGCGCGTG AAAACGCCCG TGCGGTGCGC
GGCGCGCTGA CCACCGAGGT GTGGGAGACC ACCAACCACA CCTGGCTCGA GTTCAACAGC
CTGCTGCGCG AACGCTCCTT CGAGCGCGAT CCGAGCGCCA TGTTCGAGTG GGTCAAGTTC
CGCTCGCACC TGTCGCGCGG CGTGCAGGTG GGCACCATGT TGCAGGACGA GGCGCTGCAT
TTCGTGCGCA TCGGCACCTT CCTGGAGCGT GCCGACAACA CCGCCCGGCT GCTCGATGTC
AAGTTCCATG CCGTCGAGAG CGACTTCTAC GGCGCGGCCG ACGCCAAGGA CATCGAATAC
GACTTCTATC ACTGGTCGGC GATACTGCGG TCGGTGTCCG GTTTCGAGGT CTACCGCAAG
GTCTACCGCA ACGTCATCCA GCCCGAGAAG GTGGCCGAGT TGCTGATCCT GCGCCCGGAC
ATGCCCCGTT CGCTGGCAGC CTGCACCAAC GAGGTGATCG CCAACCTCGG CCTGGTGGCC
AATGACCAGT CGTCCGAGAC GCTGCGGCGC GCCGGCCGTC TGCGTGCCGA TCTCGAATAC
GGCCGCATCG ACGAGATCCT GGCCACCGGC CTGCACGCCT ACCTGACCCA GTTCCTCGAC
CGGGTGAGCG ACCTGGGTGC GGGCATCAGC CGCGATTTCC TGGTTCCCAC GGCGCACTGA
|
|---|
| Protein sequence | MLSRTADHLF WMSRYMERAE NTARMLDVNY QTSLLPQSAA VTEQGWRGLL SISELSGDYA
TRYGEIDARK VMDFMLRDER NPSSILCCLR AARENARAVR GALTTEVWET TNHTWLEFNS
LLRERSFERD PSAMFEWVKF RSHLSRGVQV GTMLQDEALH FVRIGTFLER ADNTARLLDV
KFHAVESDFY GAADAKDIEY DFYHWSAILR SVSGFEVYRK VYRNVIQPEK VAELLILRPD
MPRSLAACTN EVIANLGLVA NDQSSETLRR AGRLRADLEY GRIDEILATG LHAYLTQFLD
RVSDLGAGIS RDFLVPTAH
|
|---|
| |