Gene Lcho_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2602 
Symbol 
ID6163515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2848228 
End bp2848923 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content65% 
IMG OID641665378 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001791632 
Protein GI171059283 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.550233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAC TCTACTCCTG GGCCACGCCC AACGGTCACA AGGTCCACAT CATGCTCGAG 
GAGTGCGGAC TGCCTTACCG GGTGCACCCG GTCGACATCG GTGCGGGCGA CCAGTTCGAT
CCCGATTTTC TCGCCATCAG CCCGAACAAC AAGATCCCGG CGATCACCGA TCCCGACGGG
CCGGACGGCA AACCGATCTC GCTGTTCGAG TCGGGCGCGA TCCTGCTGTA CCTGGCCGGC
AAGACCGGAC GCCTGCTGCC CGCCGACACC GCCGGCAAGT ACGAGGTGCT GCAGTGGCTG
ATGTTCCAGA TGGGCGGCGT CGGCCCGATG CTGGGCCAGG CGCACCACTT CCGGATCTAT
GCGCCCGAGA AGGTGCCCTA CGCGATCGAT CGCTACACCA ACGAGGCGAA ACGGCTGTAC
CAGGTGATGA ACAAGCGCCT GGCCAGATCG AAGTACATCG GCGGGCCGAC CTATTCGATC
GCCGACATCG CCATCTACCC CTGGCTGCGC TCCTGGAAGA ACCAGGGCAT CGACTGGAGC
GACTACCCGC ACCTCAAGGG CTGGTTCGAC GAGATCGGCG CCCGGCCTGC GGTGCAGCGC
GGCGTCGAGG TGCTGGCCGC CCGGCGCAAG CCGATCACCG GCGACAAGGA ACGCGAGATC
CTGTTCGGCC AGTCACAGCT GAACCAGCAC CGCTGA
 
Protein sequence
MIELYSWATP NGHKVHIMLE ECGLPYRVHP VDIGAGDQFD PDFLAISPNN KIPAITDPDG 
PDGKPISLFE SGAILLYLAG KTGRLLPADT AGKYEVLQWL MFQMGGVGPM LGQAHHFRIY
APEKVPYAID RYTNEAKRLY QVMNKRLARS KYIGGPTYSI ADIAIYPWLR SWKNQGIDWS
DYPHLKGWFD EIGARPAVQR GVEVLAARRK PITGDKEREI LFGQSQLNQH R