Gene Lcho_2584 details

Gene Information

• Locus tag: Lcho_2584
• ID: 6163070
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 2824376
• End bp: 2825002
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 641665359
• Product: Sua5/YciO/YrdC/YwlC family protein
• Protein accession: YP_001791614
• Protein GI: 171059265
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0009] Putative translation factor (SUA5)
• TIGRFAM ID: [TIGR00057] Sua5/YciO/YrdC/YwlC family protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 0.011828
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTCAAT TCTTTGAAGT CCACCCGGAC AACCCACAGC CGCGCCTGCT CAAGCAGGCG 
GTGGCCATCA TCGCCGCCGG CGGCGTGGCG GCGATCCCGA CCGACTCGAG CTACGCGCTG 
GTCTGCCAGC TCGACGACAA GGCCGCCGCC GACGCGCTGC GGCGCATCCG CGGCGTCGAC 
GACAAGCACC ACCTGACGCT GCTGTGCCGC GACCTGTCCG AGCTGTCGAG CTACGCGCGG 
GTCGACAACC GCCAGTACCG CCTGCTCAAG AGCGCCACGC CGGGGCCGTA CACCTTCATC 
CTCGAGGCCA CCAAGGAGGT GCCGCGGCGG CTGTCGCACC CGTCGCGCCG CACCATCGGC 
CTGCGCGTGC CCGACCACCG CGTCACGCAG GATCTGCTCG ATCTGTTCGG CCAGCCGCTG 
CTGGGCACCA CGCTGATCCC GCCCGGCGAG ATCCACCCGC TCAACGACTG CGCCGAGATC 
CGCGAGCGCT TCGAGCGCCT GGTGCAGGTG ATCGTCGACG CCGGCCCCTG CCCGGCCGAG 
CCGACCACCG TGGTCGACCT CAGCAGCGGC GACCCGGTGC TGGTGCGCGC CGGCCGCGGC 
GATCTGGCCA CCGTCGGCCT CGACTGA 

 

Protein sequence

MAQFFEVHPD NPQPRLLKQA VAIIAAGGVA AIPTDSSYAL VCQLDDKAAA DALRRIRGVD 
DKHHLTLLCR DLSELSSYAR VDNRQYRLLK SATPGPYTFI LEATKEVPRR LSHPSRRTIG 
LRVPDHRVTQ DLLDLFGQPL LGTTLIPPGE IHPLNDCAEI RERFERLVQV IVDAGPCPAE 
PTTVVDLSSG DPVLVRAGRG DLATVGLD