| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2490 |
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| Symbol | |
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| ID | 6160983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2713824 |
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| End bp | 2714486 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665260 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001791520 |
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| Protein GI | 171059171 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000000124934 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCAAGA CCATCAAGGC GGCAGACGCC GTGGCCCGCA TCCCCGACGG GGCGGTGCTG
ATGATCGGCG GCTTCATGGG CGTGGGCACC CCCCATCGCC TGGTCGACGA ACTGGTGCGC
CAGGGCAAGC GCGACCTGAC CGTGATCGCC AACGACACCG CGCGCCCCGG CGTCGGCATC
GGCAAACTGA TCAGCGCCGG GCTGGTGAAG CGGGCGATCG TCAGCCACAT CGGCACCAAC
CCCGAGACCC AGGCGCAGAT GATCGCCGGC AAGCTCGAGG TCGACCTGGT GCCCCAGGGC
ACGCTGGCCG AGCGCGTGCG CGCCGGCGGC TACGGGCTGG GCGGCGTGCT CACGCCCACC
GGCGTGGGCA CGGTGGTGGC CGACGGCAAG CGCACGCTCG AGATCGAGGG CCGCCTGTTC
CTGCTGGAGC TGCCGCTGCG GGCCGATTTC GCGCTCGTCA ACGCCCGCCA GGCCGACCAC
ATCGGCAACC TCGCCTACGC GCTGACGGCG CGCAACTTCA ACCCGCTGAT CGCGATGGCC
GCCGACGTCG TGCTGGCCGA GCCGCAGGAG ATCGTGCCGG TCGGCGTGAT CCCGCCCGAC
GCCGTCATGA CGCCGTCGGT GGTCGTCACC CACATCATCG CCAAGGAGTC CGCACATGGA
TGA
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| Protein sequence | MSKTIKAADA VARIPDGAVL MIGGFMGVGT PHRLVDELVR QGKRDLTVIA NDTARPGVGI
GKLISAGLVK RAIVSHIGTN PETQAQMIAG KLEVDLVPQG TLAERVRAGG YGLGGVLTPT
GVGTVVADGK RTLEIEGRLF LLELPLRADF ALVNARQADH IGNLAYALTA RNFNPLIAMA
ADVVLAEPQE IVPVGVIPPD AVMTPSVVVT HIIAKESAHG
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