| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2461 |
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| Symbol | |
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| ID | 6163350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2673721 |
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| End bp | 2674500 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665231 |
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| Product | methylmalonyl-CoA decarboxylase |
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| Protein accession | YP_001791491 |
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| Protein GI | 171059142 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000140768 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTTTA CCCAGATCGA CATCGGCGAC GCCATCGGCA CCATCACGCT CGACCACGAG
GCCAAGCGCA ATGCCTTGTC CGAACCGATG GTCGAGGAGA TCGTGGCCGC CCTCGAGCAC
TTCAAGAACG AGGGCGTGCG GGCCGCGATC CTGCGGGCGC AGCCCGGCAG CACGGTCTGG
TCGTCGGGCC ACGACGTGTC CGAGCTGCCC GAAGGCGGGC GCGACCCGCT CGGCTGGCAG
GATCCGCTGC GCCTGCTGAT CCGCGAGATC GAGTCCTTCC ACGCGCCGGT GATCGCGCTG
GTGGAGGGCG GCGTCTGGGG CGGCGCCTGC GAGCTGGTGT TCGCCTGCGA CATGATCATC
GCCACGCCGC AGGCCACCTT CGCGGCCACG CCGGCCAAGC TCGGCGTGCC CTACAACGCC
ACCGGCCTGC TGACCTTCCT GAACGCCGCG CCGCCGCACA TCGCCAAGGA ACTGCTGTTC
ACCGGCCGGC CCATGAGCGC GGCCCGGCTC GAGCTGCACG GCATCGTCAA CAACGTGGTC
GCGGCCGAGC AGATCACCGG ATTCACGCGC GAACTCGCCA GCGTCATCAC CCACAACTCG
CCGCTGGCGA TCGCGGTGAT GAAGGAGCAG CTGCGCATCC TGGCCGGTGC CCACGCGATG
TCGCCGGCCG GCTTCGAGCG CATCCAGGGC CTGCGCCGGG TGGTGTACGA CAGCCAGGAC
TACGCCGAGG GCATCCACGC CTTCAAGGAA AAGCGCCGGC CGGTCTACCG GGGCGAGTGA
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| Protein sequence | MAFTQIDIGD AIGTITLDHE AKRNALSEPM VEEIVAALEH FKNEGVRAAI LRAQPGSTVW
SSGHDVSELP EGGRDPLGWQ DPLRLLIREI ESFHAPVIAL VEGGVWGGAC ELVFACDMII
ATPQATFAAT PAKLGVPYNA TGLLTFLNAA PPHIAKELLF TGRPMSAARL ELHGIVNNVV
AAEQITGFTR ELASVITHNS PLAIAVMKEQ LRILAGAHAM SPAGFERIQG LRRVVYDSQD
YAEGIHAFKE KRRPVYRGE
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