| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2450 |
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| Symbol | |
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| ID | 6161643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2658464 |
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| End bp | 2660236 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665220 |
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| Product | formyl transferase domain-containing protein |
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| Protein accession | YP_001791480 |
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| Protein GI | 171059131 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.015137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCC TGCTGCTGGC GCACGCCTTC AACGGCCTGA CGCAGCGCCT GTTCTGCGCG
CTGCGCGAGG CCGGCCACAC GGTCTCGGTC GAACTCGACA TTGCCGACGC GGTGACCGAA
GAGGCGGTGG CGCTGTTCGA GCCTGACCTG GTCATCGCGC CGTTCCTGAA GCGGCGCATC
GCCGAGTCGG TGTGGTCGAC GCGGCCCTGC CTGATCGTGC ATCCCGGCCC GCCGGGTGAT
GGCGGGCCGG CTTCGCTCGA CTGGGCGGTG TGGCGCGGCG AGGCCGAATG GGGCGTGACG
GTGCTGCAGG CCACCGGCGA TTTCGACGCC GGGCCGGTGT GGGCGTGGCG GGCGTTTGCG
GTGCGCGAGG GTGCGAGCAA GGCGAGCCTG TATCGGCACG AGGTGACGCG CTGCGCGACC
GAGTCGGTGC TCGAAGCGTT GACGCGTTTT GCGCCCGGGA CGCGCGGGCC TGTGCCGCCG
CCGTCCTTGC CGGCCACGCT CGGCCAATGG CAGGGGCCGA TGACTGCGGC GATGCGGGCG
ATCGACTGGT CGGCCGACGA CACCGCCACC GTGCTGCGCA AGATCGCCGC CGCCGACGGT
CATCCGGGCG CGCCCGATGT GCTGTTCGGC CGCGTCTGCC GCCTGCACGA CGCCCATGCT
GCAAGCGCCG GGGCACTGGC CGCCGTGCCG CACGGTGCGC CCGGCGATGT GATCGCCCGT
CGCGGCCCGG CGCTGCTGCG GCGCACGCGC GACGGCGGCG TCTGGATCGG CCATGTGCGC
TGCCAACCGT TGGCCGACGA GCCGGCGCTC AAGCTCGCCG CCACCCGCGC CTTTGCCGCC
GAAACCGCCG CGCTGCCCGA ACTCGCCGTG CCGCTGCTGC GCAAGCCCGA CGAACCCGAC
GAGTGGGACG AACTGCATTA CGACGAACTC GGCCCGGCCG GCGCACGTGT GGGCTGGCTG
CGTTTCGACT TCCACAACGG CGCGATGTCG ACCCGCCAGT GCGAGCGTCT GCGCGATGCG
CTGCGATTCG CCCGCGCCCG CGACACGCAG GTGCTGGTGC TCGCCGGTGG CAGCGACTTC
TTCAGCAACG GCATCCACCT GCACGACATC GAAGCCAGCG CGCACGACGC CGGCGACAGC
GCGGCCGACG CGTCGATGCG CAACATCGTC GCGATGAACG ACGTCGTGCT GGAACTGCTG
ACGCTGACCG ACCGGCTCAC CGTCGCGCTG CTGCAGGGCA ATGCCGGCGC GGGCGGCTGC
TTCCTGGCGT TCGCGGCCGA CACGGTCTGG GCGCACGCGG GCGTGGTGCT GAACCCGCAT
TACAAGAACA TGGGCAACCT CTACGGCTCG GAGTACTGGA CCTACACGCT GCCCTTGCGA
GCCGGCGCCG CGCAGGCCGA CGCGTTGACA CGCCGCGTGA TGCAGGGCCG GCTGCCGATG
TCGGCGCACG AGGCGCGATC GCTGGGCCTG GTCGACGCCG TGCTGGCCGA CGATGCCGCC
GCGCTGCGCA ACACCGCGCA GCAGGCCGCC CTGACGCTGG CCGCAGCGCA CGATCTCGCC
GAACGCGTGG CCGCCAAGCA GCGCCGCCGC GCCGACGACG AAAGCCGACG CCCGCTGGCC
GCCTGGCGCG ACGACGAGCT GCGCCAGATG CATCGCAACT TCTACGGCTT CGACCCCAGC
TACCACGTGG CGCGCCACCA CTTCGTGACG CGCAAGCCGC GCGCCTGGAC GCCCCGGCAC
CTGGCGCTGC ACCGCCGGCC CGGGCCACGC TGA
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| Protein sequence | MRILLLAHAF NGLTQRLFCA LREAGHTVSV ELDIADAVTE EAVALFEPDL VIAPFLKRRI
AESVWSTRPC LIVHPGPPGD GGPASLDWAV WRGEAEWGVT VLQATGDFDA GPVWAWRAFA
VREGASKASL YRHEVTRCAT ESVLEALTRF APGTRGPVPP PSLPATLGQW QGPMTAAMRA
IDWSADDTAT VLRKIAAADG HPGAPDVLFG RVCRLHDAHA ASAGALAAVP HGAPGDVIAR
RGPALLRRTR DGGVWIGHVR CQPLADEPAL KLAATRAFAA ETAALPELAV PLLRKPDEPD
EWDELHYDEL GPAGARVGWL RFDFHNGAMS TRQCERLRDA LRFARARDTQ VLVLAGGSDF
FSNGIHLHDI EASAHDAGDS AADASMRNIV AMNDVVLELL TLTDRLTVAL LQGNAGAGGC
FLAFAADTVW AHAGVVLNPH YKNMGNLYGS EYWTYTLPLR AGAAQADALT RRVMQGRLPM
SAHEARSLGL VDAVLADDAA ALRNTAQQAA LTLAAAHDLA ERVAAKQRRR ADDESRRPLA
AWRDDELRQM HRNFYGFDPS YHVARHHFVT RKPRAWTPRH LALHRRPGPR
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