| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2449 |
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| Symbol | |
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| ID | 6161642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2657383 |
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| End bp | 2658438 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665219 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_001791479 |
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| Protein GI | 171059130 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.027326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA AGAAGGACTA CATCCGCCCG GTCGACTTCA AACATGGCCG CGTCGACATG
AACCACGGCG CGGGCGGGCG GGCTTCGGCG CAACTGATAG CCGAGTTGTT CGCGCGTGCC
TTCGACAACG ACTACCTGCG CCAGGGCAAC GACGGTGCGC TGCTCGACAT CCCCGCCGGC
CACCGGCTGG TGATGGCGAC CGACGCGCAC GTGATCTCGC CGCTGTTCTT TCCGGGCGGC
GACATCGGCT GCCTGTCGGT GCACGGCACG GTCAACGACG TGGCGATGCT GGGCGCGACG
CCGCTGTACC TGAGCGCGAG CTTCATCCTC GAAGAAGGCT TCGCGCTGGC CGACCTCAAG
CGCATCGTCG AGTCGATGGC CGCGGCCTCG CGTGACGCGG GCGTGCCGAT CGTCACCGGC
GACACCAAGG TGGTCGAACA GGGCAAGGGC GACGGCGTGT TCATCTCCAC CACCGGCATC
GGCGTGGTGC CGATGGACCG CCAGATCGGC GGCGCGCTGG CGCGGCCGGG CGATGTGGTG
CTGGTGTCGG GCACGATCGG CGACCACGGC GTGGCGGTGC TGTCGCAACG TGAATCGCTG
GAGTTCGAGA CCACCATCGA GTCGGACACC GCCGCGCTGC ACGGCCTGGT CGCGCGCCTG
CTGGCCGCCG TGCCTGAAGG CGCCGTGCAT TGCCTGCGCG ACCCCACGCG CGGCGGCCTA
GCGACCACGC TCAACGAGAT CACGCGCCAG TCGGGCGTGG GCATGCTGCT GCAGGAGACG
GCGATTCCCG TCGCGCCGCA GGTCAACGCC GCCTGCGAGC TGCTCGGGCT CGACCCGCTC
TACATCGCCA ACGAAGGCAA GTGCATCGTG ATCTGCGCGG CCGAACACGC CGACGCGGTG
CTCGACGCGA TGCGCGCGCA CCCGCTGGGC CGCAACGCGG CGCGCATCGG CAGCGTCACC
AACGACCCGC ACCACTTCGT GCAGATGGCC ACCGGCTTCG GCGGGCGCCG CATCGTCGAC
TGGCTCAGCG GCGAGCCGCT GCCGCGCATC TGCTGA
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| Protein sequence | MSIKKDYIRP VDFKHGRVDM NHGAGGRASA QLIAELFARA FDNDYLRQGN DGALLDIPAG
HRLVMATDAH VISPLFFPGG DIGCLSVHGT VNDVAMLGAT PLYLSASFIL EEGFALADLK
RIVESMAAAS RDAGVPIVTG DTKVVEQGKG DGVFISTTGI GVVPMDRQIG GALARPGDVV
LVSGTIGDHG VAVLSQRESL EFETTIESDT AALHGLVARL LAAVPEGAVH CLRDPTRGGL
ATTLNEITRQ SGVGMLLQET AIPVAPQVNA ACELLGLDPL YIANEGKCIV ICAAEHADAV
LDAMRAHPLG RNAARIGSVT NDPHHFVQMA TGFGGRRIVD WLSGEPLPRI C
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