Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2442 |
Symbol | |
ID | 6161862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2650448 |
End bp | 2651764 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641665212 |
Product | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein |
Protein accession | YP_001791472 |
Protein GI | 171059123 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.66244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGCAC TCAAGCGCGG TCTGGCGCGG CTGGCCTACA GCACGCTGCT GCGCGGGCTC ACGCCGCTGC TGCTGGCGCG GCTGTTCTGG CGCGCGCGGC GTGAGCCGCC GTATGGCCAG GCGATCGGCG AGCGGCTCGG TTTCGGCGCG CCCACCAAAC CGGGCGCGCT ATGGCTGCAC GCGGTCTCGC TCGGTGAAAC CCGCGCCGCC GAGCCGCTGA TCCAGGCCTT GCGCGCGGCC CGGCCTGGGC TGCGGCTGCT GCTCACGCAC GGCACCGCCA CCGGCCGCGA GACCGGCGCG GCGCTGCTGC GCGCCGGTGA CGCGCAACGC TGGCTGCCGT TCGACACCCC CGGCGCGGTG CGGCGTTTCC TGCGCCGCCA TCGGCCGGCC ATCGGCGTGC TGATGGAGAC CGAGGTCTGG CCGAACCTGC AGGCCGAGGC GCTGGCCGCC GGTGTGCCGA TGGTGCTGGC CAACGCACGG CTGTCGGACA AGAGCCTGCG CAAGTCGCTG CGGCTCGACG CGTTGATGCG GCCGGCGGTC GAGGCGCTGT CCACGGCGCT GGCGCAGACC GAGGACGACG CCCGGCGCCT GCGCGAAGCC GGCGCCCGCG ACGTGCAGGT GTGCGGCAAC ATCAAGTTCG ACCTGCGCCC CGACCCGGCC TTGCTGACGC GCGGCCGGCA CTGGCGTGTT GCTGCAGCCG GCCGGCCGAT CGTGCTGGCG GCGAGCTGGC GCGAAGGCGA GGACGAGCCC CTGCTGCAGG CCTGGGCCGC GATGCTGGCG CAATCCGACC CGTCAGCCCG CCGCCCCGTG CTGGCGCTGG TGCCGCGCCA TCCGCAGCGT TTCGACGAGG TGGCGGCGCT GGTGCAGGCC GCGGGGCTGA CGCTGTCTCG ACGCAGCAGC TGGGGCGAGG GCGACGCCGC GGTGCCCGAT GCGGCGGCGC AGGCCGACGT CTGGCTGGGC GACTCGATGC GCGAGATGCC GGCCTATTAC GCGCTGGCCG ACGTGGCGCT GCTGGGCGGC AGTTTCGCGC CGCTGGGCGG CCAGAACCTG ATCGAGGCGG CCGCCTGCGG CTGCCCGGTG GTGATGGGGC CGCACACCTT CAACTTTGCC GACGCGGCCC AGCTGGCCGA GGCCCAATCG GCCGCGCGTC GGGTGCCGGC GATCGGCAAC GGCGTGGCGT TGGCGGTCGC GCAGGCCGGT GACGTGTCGG CCCACGCGCA GGCCTCGGCC GCGGCCCTGG CCTACGCCGC GGCGCACCAG GGCGCGTCCG AACGCATGGC GGCGATCCTG CTGAAACAGG CGCGCTGGCC GGGCTGA
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Protein sequence | MIALKRGLAR LAYSTLLRGL TPLLLARLFW RARREPPYGQ AIGERLGFGA PTKPGALWLH AVSLGETRAA EPLIQALRAA RPGLRLLLTH GTATGRETGA ALLRAGDAQR WLPFDTPGAV RRFLRRHRPA IGVLMETEVW PNLQAEALAA GVPMVLANAR LSDKSLRKSL RLDALMRPAV EALSTALAQT EDDARRLREA GARDVQVCGN IKFDLRPDPA LLTRGRHWRV AAAGRPIVLA ASWREGEDEP LLQAWAAMLA QSDPSARRPV LALVPRHPQR FDEVAALVQA AGLTLSRRSS WGEGDAAVPD AAAQADVWLG DSMREMPAYY ALADVALLGG SFAPLGGQNL IEAAACGCPV VMGPHTFNFA DAAQLAEAQS AARRVPAIGN GVALAVAQAG DVSAHAQASA AALAYAAAHQ GASERMAAIL LKQARWPG
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