Gene Lcho_2428 details

Gene Information

• Locus tag: Lcho_2428
• ID: 6161009
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 2636833
• End bp: 2637480
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641665198
• Product: RES domain-containing protein
• Protein accession: YP_001791458
• Protein GI: 171059109

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 0.226672
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGAGCTGTC GGGCGCCGAA CCGCCCGCTC GACCCGCTGA TCGACACCTG GCCGGCCGGC 
CAGGTGATCC ACGTGATCCA CGACGCCGCC TACGAGCCCG GCAGCTTCAA CCCCGGTGTC 
GATGCGGCCG GCCAGTTGCG CACGCCGACG CGCTTCGCGC CCATCCGCGA CGCCTGCGGC 
CAGGTCGTGC CGTATCTGTA CGGCGGCTCG TCACGCGACT GCGCGATCTT CGAGACGGTG 
TTCCACAACG TGCCGATCGA TGCCGCCGAC AAGTTCGTCG ACCTGGATGA CCACGCGAAT 
CGCGCTCACG GCCAGATCGT GCCGCAGCGC GACCTGCGGC TGATCAACCT GACGACCGAC 
GGGCTGCATC GGCTGAAGGT GCCCAAGTCC GAGCTGATCG CGAGTGCGCC GATCGACTAC 
CTCGACACCG CGCGCTGGGC CGAGGCCCTG CACCGGCAAT GTCCCGACGT GGACGGCCTG 
CTGTGGATGT CGCGCCAGCG CGATCGCGAT CAGGCGCTGC TGCTGTTCGG CGACCGGGTG 
GGCGCGGCGC TCACCGGCAC GCGCATGGGC CCGGCCTTGC GCGGCAACGA CGTGCTGCGC 
CAGGCCATCC TGACGCTGGC GCTGCGGGTG GGCATCGACG CGTCGTGA 

 

Protein sequence

MSCRAPNRPL DPLIDTWPAG QVIHVIHDAA YEPGSFNPGV DAAGQLRTPT RFAPIRDACG 
QVVPYLYGGS SRDCAIFETV FHNVPIDAAD KFVDLDDHAN RAHGQIVPQR DLRLINLTTD 
GLHRLKVPKS ELIASAPIDY LDTARWAEAL HRQCPDVDGL LWMSRQRDRD QALLLFGDRV 
GAALTGTRMG PALRGNDVLR QAILTLALRV GIDAS