| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2411 |
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| Symbol | |
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| ID | 6163413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2617925 |
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| End bp | 2618707 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665181 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001791441 |
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| Protein GI | 171059092 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.446483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAC CCTTTGTGCT GGCCGCCTGC GCCGAAATGC TTTGGAACGA TCGCCCGATG
TCGTGGCGGC TCGCCCGCCT CACCGAGATG GGCTTCGAGG TCGGCATCTG GAACTCGCCC
AACCATGACC TGGCCATGCT CGAGAAGTCG GGCGCGCGCT TCTCGTCGAT GACCGGCTAC
CTGCGCGGCC GCCTGGCCGA TGACGCCGGT GCCGACGAGT TGCTGGCCAC CGCCGCCGAG
GCGATTGCCG TCGGCAAGCG TCTGAACGTG GCGCGGCTCA ATCTGCATGG CACGGGTCTG
GGCGACCGCG GCCTGCCCGT CACGCCCTGC GAGACCGTCA CCGGCGCGAT GTGGCTCAAG
GCGCGCGACA CGCTCGAGCG CATCGCCGAC CTGGCCGAGA CGCACGGCGT CACCTTCATG
ATCGAAAACC TGAACCTGCC CGTCGATCAC CCCGGCGTGC CGTTCGCGCT CGCCAAGGAC
ACGCTGGCCT TGGTGTCGTC GATCAACCGC CCGGGCCTCA AGCTCAACCT CGACCTCTAT
CACGCGCAGA TCGGCGAGGG CAACCTGATC GAGCTGTGCC GCGCCTGCCA GCCGTGGATC
GGGGAGGTGC AGGTGGCCGA CGTGCCCGGC CGCATGGAGC CCGGCACCGG CGAGATCAAC
TACGCCGGCG TGGCCCGCGC GCTCAAGGCA ATGGGCTATC GAGGCACGGT CTGCATGGAG
GCGTTTGCCT CGGGCGACGC CGAGGCAGCG CTCGAAGCCT TCCGCACCGC GTTCACGGTC
TGA
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| Protein sequence | MSSPFVLAAC AEMLWNDRPM SWRLARLTEM GFEVGIWNSP NHDLAMLEKS GARFSSMTGY
LRGRLADDAG ADELLATAAE AIAVGKRLNV ARLNLHGTGL GDRGLPVTPC ETVTGAMWLK
ARDTLERIAD LAETHGVTFM IENLNLPVDH PGVPFALAKD TLALVSSINR PGLKLNLDLY
HAQIGEGNLI ELCRACQPWI GEVQVADVPG RMEPGTGEIN YAGVARALKA MGYRGTVCME
AFASGDAEAA LEAFRTAFTV
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