| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2388 |
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| Symbol | |
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| ID | 6159907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2595276 |
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| End bp | 2597090 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665158 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791418 |
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| Protein GI | 171059069 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGA TCGCCGCGAT GCCACCGCCC GAATTGATGC CACTGATACC TGCAACCCCG
TCCACCCGGA TCGCCGCGCA GGCCCGCCTG CGCCTGCCGC TGGCGGCCGC CGTGCTGAGC
CTGTCGCTGA TGCTCGCTGC CTGCGGCGGC GGCGGCGCTT CGAGCGACGA GACCGGCGCC
GCTGCCCGTG TGCCCGTCAC CAGCGAGGCC GAAGCCGTGC GCCTGCTCGA CCAGGCCACC
TTCGGCGCCA CGCCGATCGA GGTCCAGCGC GTCAGGGATC TCGGTGCCAG CGCCTGGATC
GACGAGCAGA TGGCCAAGCC GGCCACGTCC AGCCGCACGC ACTGGGAGAT GCTGGACCGG
CAGAACAAGG CCGCCGACCC GACCGCTGTC AGCCGCACCG AGGTCTATCA CAGCTTCTGG
CACAACGCCG TCAGCGCGCC CGACCAGCTG CGCCAGCGGG TGGCCTACGC GCTGTCGCAG
ATCATGGTGG TGTCGATGGT CGATTCGGGC GTCAACGATC AGCCGCGCGG TGTCACCAGC
TACTACGACA TGCTCGGCCA GCATGCGTTC GGCAACTATC GCCAGCTGCT GCAGGATGTC
TCGCTGCACC CGGTGATGGG CATCTACCTC TCGCACCTGC GCAACCAGAA GGAAGACCTC
GCCAAGGGCC GCGTGCCCGA CGAGAATTTC GCCCGCGAGG TGATGCAGCT GTTCTCGATC
GGCCTGGTCG AACTCGACCT CGACGGCAGC GCCAGCGCCG GTGGCCCGCG CGAGACCTAC
GGCGCCGACG ACATCTCCGG CCTGGCCAAG GTCTTCACCG GCTGGAGCTG GCACTGCAAC
GGCGACACCA GCGACAGCTG CTTTCACGGC TGGAACGAAT CGGCCAAGGC CTACCCGGAT
CGCAGCATCG CATCGATGCG CAGCTACGCG AAGTACCACT CGGCCAGCGA GAAGGCGTTT
CTCGGCAGCA CGGTGGCCGG CGGCAGCGAC GGCGATGCCA GCCTGAAAGT CGCGCTCGAC
CGGCTCGCCG CCCACCCGAA CGTCGGCCCC TTCATCGGCC GCCAGCTGAT CCAGCGCCTG
GTCACCAGCC ATCCCAGCCC GGCGTATGTG GAGCGGGTGG CCAAGGTGTT CAACAACAAC
GGCAGCGGCG TGCGCGGCGA TCTCAAGGCC GTGGTCAAGG CCGTGCTGCT CGACACCGAA
GCCCGCGCGC CCTCGGCCGC GCAGCGCGAC AGCTTCGGCA AGCTGCGCGA GCCGGTGCTG
CGCCTGAGCA AGGTCCTGCG TGCGTTCGGT GCCACGTCCA CCTCCAGCCA CTGGTTGATC
GGCAACACCG ACGACCCCGG CACCTCGCTG GGCCAGACGC CGCTGCGTTC GCCCTCGGTC
TTCAACTTCT ACCGCCCCGG CTACGTGCCG CCCAACACGC TGGCCGCGGC CCGTTCGCTG
ACCGTGCCCG AGATGCAGAT CACGCACGAG ACCAGCGTGG CCGGTTATGC CAACTTCATG
CGCAGCGTGG TGCAGAACAA CGGGGTGGGC GAGACGCCCG CCGGCGCGAG CACGCGGGAT
GTGCAGCTCG ACCTCTCGGC TGCACGGGCA GCCGCCCACA AGCCCGATGA ACTGGTGGCG
CTGATGAACA GCCGCCTGTT CGGTGGCGCC ATGCCCGCCG CACTGGCCGA TCAGATCCAG
GCGGCCGTGG AGTCGATCAC CATTCCGCTG CTCACGAGCA CGAACATGGT GGCCTGGGAA
GCCGCCAACT CCAATCGTGT CCGGCTGGCG CTCTACCTGA GCGTGGTGTC GCCCGAGTTC
ATCGTCCAGA AGTGA
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| Protein sequence | MSLIAAMPPP ELMPLIPATP STRIAAQARL RLPLAAAVLS LSLMLAACGG GGASSDETGA
AARVPVTSEA EAVRLLDQAT FGATPIEVQR VRDLGASAWI DEQMAKPATS SRTHWEMLDR
QNKAADPTAV SRTEVYHSFW HNAVSAPDQL RQRVAYALSQ IMVVSMVDSG VNDQPRGVTS
YYDMLGQHAF GNYRQLLQDV SLHPVMGIYL SHLRNQKEDL AKGRVPDENF AREVMQLFSI
GLVELDLDGS ASAGGPRETY GADDISGLAK VFTGWSWHCN GDTSDSCFHG WNESAKAYPD
RSIASMRSYA KYHSASEKAF LGSTVAGGSD GDASLKVALD RLAAHPNVGP FIGRQLIQRL
VTSHPSPAYV ERVAKVFNNN GSGVRGDLKA VVKAVLLDTE ARAPSAAQRD SFGKLREPVL
RLSKVLRAFG ATSTSSHWLI GNTDDPGTSL GQTPLRSPSV FNFYRPGYVP PNTLAAARSL
TVPEMQITHE TSVAGYANFM RSVVQNNGVG ETPAGASTRD VQLDLSAARA AAHKPDELVA
LMNSRLFGGA MPAALADQIQ AAVESITIPL LTSTNMVAWE AANSNRVRLA LYLSVVSPEF
IVQK
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