| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2350 |
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| Symbol | |
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| ID | 6159796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2554147 |
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| End bp | 2555085 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665119 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001791380 |
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| Protein GI | 171059031 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 122 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACA ACAGCAAAAT CTACGTCACC GGCCACCGCG GCATGGTCGG CTCGGCCATC
GTGCGCCGGC TCCAGTCGCT GGGTTACAGC AACATCCTCA CCCGCACCCA CGCCGAACTC
GACCTGCTCG ACCAGCGCGC GGTGCACGCC TTCCTGGCCG AACAGAAGCC CGACTACATC
TTCATCGCCG CAGCCAAGGT CGGCGGAATC CAGGCCAACA ACCTGTACCG TGCCGACTTC
CTGTACCAGA ACCTGCTGAT CGAGGCCAAC CTGATCCACG GCGCCCACCT AGCCGGCGTG
CAGCGCCTGA TGTTCCTGGG CAGCAGCTGC ATCTACCCGC GCGACTGCCC GCAGCCGATC
AAGGAGGACT ATCTGCTGAC CGGCCCGCTC GAACAGACCA ACGAGCCCTA CGCCATCGCC
AAGATCGCCG GCATCAAGCT GGCCGAAAGC TACAACCGCC AGTACGGCCG GCAGTACATC
AGCGCGATGC CGACCAACCT CTACGGCCCC AACGACAACT ACGACCTCGC CAACAGCCAC
GTGCTGCCGG CGCTGCTGCG CAAGGCGCAC GAGGCCAAAC AACGCGGCGA CGCCGAATAC
GTGGTCTGGG GCAGCGGCAC ACCCAAGCGC GAGTTCCTGT ACGTCGACGA CCTGGCCGAC
GCCTGCGTGC ACCTGATGGA AACCGGCTAC GACGGCCCGC TCGTCAACAT CGGCACCGGC
GAGGACGTGA CCATCCGTGA ACTGGCCGAA ACCGTGATGC AGATCGTCGG TTTCGAGGGC
CGCATCGTCT TTGACGCCAG CAAGCCCGAC GGCACGCCGC GCAAGCTGCT GGATGTGAGC
CGGCTCAAGA GCCTGGGCTG GAGCGCGAGC ACCTCGCTGC GCAACGGCAT CCGGCTGGCT
TATGAGGCTG CGCCGTTTCA TACCCCGATC TCTGTTTAA
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| Protein sequence | MNHNSKIYVT GHRGMVGSAI VRRLQSLGYS NILTRTHAEL DLLDQRAVHA FLAEQKPDYI
FIAAAKVGGI QANNLYRADF LYQNLLIEAN LIHGAHLAGV QRLMFLGSSC IYPRDCPQPI
KEDYLLTGPL EQTNEPYAIA KIAGIKLAES YNRQYGRQYI SAMPTNLYGP NDNYDLANSH
VLPALLRKAH EAKQRGDAEY VVWGSGTPKR EFLYVDDLAD ACVHLMETGY DGPLVNIGTG
EDVTIRELAE TVMQIVGFEG RIVFDASKPD GTPRKLLDVS RLKSLGWSAS TSLRNGIRLA
YEAAPFHTPI SV
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