Gene Lcho_2262 details

Gene Information

• Locus tag: Lcho_2262
• ID: 6161250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 2464198
• End bp: 2464989
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641665032
• Product: hypothetical protein
• Protein accession: YP_001791293
• Protein GI: 171058944

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 61
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATGCGCG ATGCCTTCAG CCTACGCGCG GTTGTACCGG TGGGAGGGGT GTACGGAGCC 
TTGATCGGAT CCCTTCACGT GGCAGAGCCA GAGGACCCGA GAAACGATGT GACCGGGGAG 
ATTTATCGCT TCCTCAAGCT GGACCCGAAT GAGCCTTGGT TCAATGCGGA AACTCGCGAG 
GCTGCGACGG CCAAAGAGTT GCGGCAAATC AGCATTCCTG AACACCTGCT GCCCCATTTG 
CAGCGGATCC CCTTCGTCTT CAGGCCGAAG GTGCACAGGC TTTACTTCGT GGCAAGGGAT 
CGCAAGGACA GCCTCGCGCC AAGTACCGCC AAGTTGCTCT TCGAGGCAGT GCTGAACCGT 
TTGACCAACG AGCTGAACTA TCCACCCTTC GAGGTCACCG TTCGTCCGGA CAAAGGGGCA 
CTCGATGAAG TCCTGAGTCT GGCTTCGCTG GAGCACATCG TCATCGATCT TGTTCCCCCC 
AACGCGGACG ATGGACACGC AGAGCAAGAG CGATGGAAGA AGAAGTTGAA GGCCCAAAAC 
GTGCGCCGTC AAACTCTCAG ACTCGATGGG TTGAGGAATG AATCCATCAA GCCAGACAAG 
GACACGTTGG AACTGGCCAG AGTGGCTTCC CACAACGGCA AGGTCACCGC CAGCGGCCAC 
GACCTCAATG GCATGAAGCA GGAGCTTTCA ACAACCGACA GGCCTTTGAT CGAGCGAGTT 
CTTGTGAATC CGGAGGTCGA AACCGTCATG CTGGCGCTCA AGCGGACTGC GGACGTTCTG 
GGCACGGAAT AA 

 

Protein sequence

MMRDAFSLRA VVPVGGVYGA LIGSLHVAEP EDPRNDVTGE IYRFLKLDPN EPWFNAETRE 
AATAKELRQI SIPEHLLPHL QRIPFVFRPK VHRLYFVARD RKDSLAPSTA KLLFEAVLNR 
LTNELNYPPF EVTVRPDKGA LDEVLSLASL EHIVIDLVPP NADDGHAEQE RWKKKLKAQN 
VRRQTLRLDG LRNESIKPDK DTLELARVAS HNGKVTASGH DLNGMKQELS TTDRPLIERV 
LVNPEVETVM LALKRTADVL GTE