| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2243 |
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| Symbol | |
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| ID | 6163218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2449476 |
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| End bp | 2450357 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641665013 |
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| Product | Mu-like prophage major head subunit gpT |
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| Protein accession | YP_001791274 |
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| Protein GI | 171058925 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4397] Mu-like prophage major head subunit gpT |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCA ACGCCGCCAC CCTTGCCCTG CTCGCGCAGA CCGTCGACAT GCGTTTCCAG
GCGGGCCTGG CCCGCGCCGT GACCGCGTGG GACGCCGTCG CGATGACCGT CCCGAGCGCC
TCGGCCGAGA ACATCTACCC GTACCTGAAG GACGTGGGCG CCATCCGCGA GTGGGTGGGC
GATCGCGTGA TCCAGAACCT GGCCAAGGGC GAGTTCTCGA TCAAGAACAA GTCCTACGAG
CAGACCCAGG GCGTGCCCCG CACCGCGGTG GATGACGATG CCTACGGTGT CTACGGCCCG
ATGTTCGAGA ACATGGGCCT GAACGTGGCT TCGTTCCCGG CCGACCAGAT TTTCCCGACC
CTCAAGGCCG GCTTCACCAC GCTGGGCCCC GATGGCCAGT ACTTCTTCGA CACCGACCAC
CCTGTGGGCT CGGGCGTGGT GAGCAACCAC ATGGGTGGCG CGGGCGAGGC CTGGTACATC
ATCGACGCGA GCAAGGTCTA CAAGCCGGTG ATCTGGCAGC CGCGCAAGGC GTTCAACATG
GTCAAGCTCT TCAGCGAGAC CGACCCGAAC GTGTTCTTCA AGAGCGAGTA CGTCTGGGGC
GTCGACGGCC GCGCGGGCGT GGGCTACAGC CCGTTCTGGC AGCTCGCGTT CGCCAGCAAG
CAGACGCTCG ACGCCACCAA CATCACCGCA ACGCTGACCG CGATGGCCAG CCAGCGCGGC
GAGAGTGGCA AGCCGCTCAA GATCACCCCG ACCCACCTGG TGTGCAGCCC GACCCTGGCC
GAGACCGCCC GCGCGATCTT CGGCAAGGAG CTGATCAGCA ACGGCGAGAG CAACGTGCTC
AAGGGCCGTC TGCAGGTGAT CGAGGCGCCC GAACTGCTGT AA
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| Protein sequence | MILNAATLAL LAQTVDMRFQ AGLARAVTAW DAVAMTVPSA SAENIYPYLK DVGAIREWVG
DRVIQNLAKG EFSIKNKSYE QTQGVPRTAV DDDAYGVYGP MFENMGLNVA SFPADQIFPT
LKAGFTTLGP DGQYFFDTDH PVGSGVVSNH MGGAGEAWYI IDASKVYKPV IWQPRKAFNM
VKLFSETDPN VFFKSEYVWG VDGRAGVGYS PFWQLAFASK QTLDATNITA TLTAMASQRG
ESGKPLKITP THLVCSPTLA ETARAIFGKE LISNGESNVL KGRLQVIEAP ELL
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