| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2230 |
|---|
| Symbol | |
|---|
| ID | 6163674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 2435163 |
|---|
| End bp | 2435615 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641665000 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001791261 |
|---|
| Protein GI | 171058912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG GCAAGTGGAG CTTTTGCGAC GCGGGCGGGG TGTTCACGGG CGCGATGTAC
TCGGGGCCTG AGGATTTGCT CGAGATCAAC ACGCCTGCCG GATGCGCTGC CATCCCGGGC
GATCACGACC ACCTGCGCGT CCGCGTCGAC CTCGAAACCG GCGCAGTCGT CCCGTACCGG
CCGCCCCCGC CGGCTGACGA CGATTGGCAG ACGTGGGCGT GGGATGAGAC CGCGGAACTG
TGGGTGAGCG TCCCCACGCT GGCTGCAATC GCCGCGACTG TGAGGTCTGA GCGTGACCGC
AGGATGGCTG GCGCCGACTG GGTCACTCTG CGCGCCATGC GTCGCGGCGA GCCCGTGCCT
ACAGAGTGGG CAGCCTACCT GCAGGCGTTG GCTGACGTTC CAGCGCAGCC TGGCTTCCCG
TTCGAGGTCA CTTGGCCAGT TGAGCCGGCG TGA
|
|---|
| Protein sequence | MSMGKWSFCD AGGVFTGAMY SGPEDLLEIN TPAGCAAIPG DHDHLRVRVD LETGAVVPYR
PPPPADDDWQ TWAWDETAEL WVSVPTLAAI AATVRSERDR RMAGADWVTL RAMRRGEPVP
TEWAAYLQAL ADVPAQPGFP FEVTWPVEPA
|
|---|
| |