| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2147 |
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| Symbol | |
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| ID | 6163719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2347685 |
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| End bp | 2348692 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664915 |
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| Product | sodium/calcium exchanger membrane region |
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| Protein accession | YP_001791178 |
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| Protein GI | 171058829 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000206707 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATCCGG CCCTGTCCAT CTGGATCCAG TTCAGCCTGT GTGCCGCGGT GATCGGCGTG
GCGGGTTCGC GGTTGAGCCG CTACGGCGAT GCGATCGCCA GCCACACCGG CCTGTCGCGC
AACTGGATCG GCCTGGTCCT GGTGGCCACG GTCACGTCGC TGCCTGAACT GGTCACCGGC
CTGAGCGCCG TGACCGTGGC CGATGCGCCC GACATCGCGG TCGGCGACGC GCTGGGCAGC
TGCGTCTTCA ATCTGGCCAT CCTCGCGCTG GTCGACGTGT TCTACCGGCA CGGTGCGATC
TATGCGACTG CCAGCGCCAC GCACGCCATG TCCGCGGGGC TGGGGGTGAT CCTGTTGTCG
GCGGTCAGCC TGGCCTTGGT GCTGAGCCAG CAGGGCAGCA TGCCTGCGCT CGGTCATTTC
AGCCTGGCCA GCGTGCTGAT CGTGGCGATC TACCTCATCG GCATGCGCGC GCTCTACCTC
ACCGAGCAAC GACGGGGCAA CTCCGCCCCC GTCGAGACAC CGACGGCGAT GACGCTCAAG
ACGGCCCTGA TGGGCTACGG CATCGCCTCG GCCGTGATCG TCGGCATGGG CATCTGGCTG
CCGCTGATCG GTGTCGAACT GGCCCACCTG ATGGGCTGGT CGAACTCCTT CGTCGGCACG
CTTTTCGTGG CACTGGCCAC CTCGGTGCCG GAACTCGCCA CCACCTGGGG CGCGGTGCGC
ATCGGCGCCA TCGACATGGC TTTCGGCAAC CTGCTGGGCA GCAACCTGTT CGACGTGCTG
ATCCTGGCCG TCGATGATTT TGCGTATCTG AGCGGGCCGC TCTATCAGCA TCTGTCGCCG
CTGCACATCG TCTCTGCGCT GACCGCCTGC ATGATGAACG GGGCGGTGAT CGTGGCGCTG
GTCTACCGGC CGGTCTCACG CGTGTGGCGT TCGGCCAGCT GGGCCAGTCT CGTGCTGCTG
GCGCTGTATC TGTTCAATGC GGTGGTGCAG TACCTGCACG GACGCTGA
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| Protein sequence | MHPALSIWIQ FSLCAAVIGV AGSRLSRYGD AIASHTGLSR NWIGLVLVAT VTSLPELVTG
LSAVTVADAP DIAVGDALGS CVFNLAILAL VDVFYRHGAI YATASATHAM SAGLGVILLS
AVSLALVLSQ QGSMPALGHF SLASVLIVAI YLIGMRALYL TEQRRGNSAP VETPTAMTLK
TALMGYGIAS AVIVGMGIWL PLIGVELAHL MGWSNSFVGT LFVALATSVP ELATTWGAVR
IGAIDMAFGN LLGSNLFDVL ILAVDDFAYL SGPLYQHLSP LHIVSALTAC MMNGAVIVAL
VYRPVSRVWR SASWASLVLL ALYLFNAVVQ YLHGR
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