| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2119 |
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| Symbol | |
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| ID | 6162039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2316872 |
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| End bp | 2318044 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664888 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001791151 |
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| Protein GI | 171058802 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.148025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAGT CCACCTTCAC CTTCCCGCTC GGCGACGACA TCGCCGCCCT GCGCGAGGCC
GTGCGCGACT TCGCGCAAAA CGAGATCGCG CCGCGCGCAG CCGACATCGA CCGCGCCAAC
CAGTTCCCGG CCGACATGTG GATGAAGCTC GGCGACCTGG GCGTGCACGG CCTGACGGTG
CCCGAGGAAG ACGGCGGCAC CGGCATGGGC TACGTCGCCC ACATGGTGGC GATGGAAGAG
GTCAGCCGCG CCAGCGCCTC CGTGGGCCTG AGCTACGGCG CGCACAGCAA CCTGTGCATC
AACCAGATCA ACCGCAACGG CACGGCCGCG CAGAAGGCGC GTTACCTGCC CCGGCTGATC
AGCGGCGAAC ACGTCGGCGC GCTGGCGATG AGCGAGCCCA ACGCCGGCTC CGACGTCGTC
AGCATGAAGC TGCGTGCCGA CAAGCGCGGC GACCGCTACG TGCTCAACGG CAGCAAGATG
TGGATCACCA ACGGCGGCGA CGCCGACACG CTGGTGGTCT ACGCCAAGAC CGAGCCGCAG
ATGGGCGCAC GCGGCATGAC GGCGTTCATC ATCGAGAAGG GCTTCAAGGG CTTCAGCCAC
GGCACCCATC TCGACAAGCT CGGCATGCGC GGCTCCAACA CCTACCCGCT GTTCTTCGAG
GACTGCGAAG TGCCGGCCGA AAACGTGCTC GGCGGCGAGG GCAACGGCGC CAAGGTGCTG
ATGTCGGGCC TGGACTACGA GCGCGTGGTG CTCTCGGGCG GGCCGCTGGG CATCATGGCG
GCCTGCATGG ATGCGGTCGT GCCCTTCGTG CACGAGCGCA AGCAGTTCGG CCAGTCGATC
GGCGAGTTCC AGCTGATGCA GGGCAAGCTG GCCGACATGT ACAGCACCTT CCAGGCCTGC
CGCGCCTACG CCTACGCGGT GGCGCAGGCC TGCGACCGCG GCGACCACAG CCGCACGCTG
CGCAAGGACG CCGCCGGCGT GATCCTCTAC ACCGCCGAGA AGGCGACCTG GATGGCCGGC
GAGGCGATCC AGGCGCTCGG CGGCGTCGGC TACACGAATG AATACCCGGT CGGCCGCCTG
TGGCGCGACG CCAAGCTCTA CGAGATCGGC GCCGGCACGT CGGAGATCCG CCGCATGCTG
ATCGGCCGCG AACTCTTCGC CGAGACCTGC TGA
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| Protein sequence | MFESTFTFPL GDDIAALREA VRDFAQNEIA PRAADIDRAN QFPADMWMKL GDLGVHGLTV
PEEDGGTGMG YVAHMVAMEE VSRASASVGL SYGAHSNLCI NQINRNGTAA QKARYLPRLI
SGEHVGALAM SEPNAGSDVV SMKLRADKRG DRYVLNGSKM WITNGGDADT LVVYAKTEPQ
MGARGMTAFI IEKGFKGFSH GTHLDKLGMR GSNTYPLFFE DCEVPAENVL GGEGNGAKVL
MSGLDYERVV LSGGPLGIMA ACMDAVVPFV HERKQFGQSI GEFQLMQGKL ADMYSTFQAC
RAYAYAVAQA CDRGDHSRTL RKDAAGVILY TAEKATWMAG EAIQALGGVG YTNEYPVGRL
WRDAKLYEIG AGTSEIRRML IGRELFAETC
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