| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2113 |
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| Symbol | |
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| ID | 6162020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2310065 |
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| End bp | 2310772 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664882 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_001791145 |
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| Protein GI | 171058796 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.187169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACCG GCATCGTCCA AGCCGTCGCC ACCGTCGTGG CCATCACCGA CCGCCCCGGC
CTGCGCAGCT TCACGCTCGA ATTCCCGCCG GGCTTCATCG ACGGCCAGGA GATCGGCGCC
AGCGTCGCCT GCGACGGCGT CTGCCTGACC GTCACCGCCC ACCACGGCGG CCAGCGCGCC
GATTTCGACG TCATGCAGCA GAGCCTGATG CTCACCACAC TGGGCACGCT CGAGGTCGGC
AGCCGCATCA ACGTCGAACG CGCCGCGCGC GACGGCGTCG AGATCGGCGG CCACCCGATC
TCGGGTCACG TCGACTTCCA GGCCCACGTG GCCGAAGTGC GCCAGCCCGA GAACAACCAC
GTGCTGCGCA TCGCCGTGCC GCAACCGTGG ATGCGCTACG TCTTCCCGAA GGGCTACATC
GCCATCAACG GCGCCAGCCT GACCGTGGCC GAGGCCGACC GCAAGGCGGG TTGGTTCGAG
GTCTGGCTGA TCCCAGAAAC CCTGCGCCAG ACCACCTTCG GTGCCAAGGA CGCGGGCAGC
GCGCTCAACA TCGAGATCGA ACGCGGCACC CAGGTGATGG TCGACACCGT GCGCGACACG
CTCGAAGAAC GCCTGGGCCC GCTGCTGCCC GCGCTCGAAG CGCTGCTGCG CGAACGTGGC
CTGGACGTGA CCGCGCTCGG CGGCACGCCC GCCCTGCTCC AACCTTGA
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| Protein sequence | MFTGIVQAVA TVVAITDRPG LRSFTLEFPP GFIDGQEIGA SVACDGVCLT VTAHHGGQRA
DFDVMQQSLM LTTLGTLEVG SRINVERAAR DGVEIGGHPI SGHVDFQAHV AEVRQPENNH
VLRIAVPQPW MRYVFPKGYI AINGASLTVA EADRKAGWFE VWLIPETLRQ TTFGAKDAGS
ALNIEIERGT QVMVDTVRDT LEERLGPLLP ALEALLRERG LDVTALGGTP ALLQP
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