| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1959 |
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| Symbol | |
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| ID | 6161748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2123271 |
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| End bp | 2124302 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641664728 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790991 |
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| Protein GI | 171058642 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGC GCGTAGTTTT CGCGGTTGCC GGCTCGGGCA AGACCACCAG CCTGATTGCC
GCGCTGGACG AGGTGCGGCG CTTCCTGCTG GTCACCTACA CCGACGCCAA TCACGACAAC
CTGCGGGCCA AGGTCATCGA GCGCTTCGGC TACGTGCCGC CCAACATCGC GATCTACACT
TACTTCAGCT TCCTGCATAG CTTTTGCTAC CGGCCGTTCC TGCGATCCAA GAAGGGCACG
CGGGGCATCA CCTTCAGCAC GCCAGAGCGG TTTCCGAACT ACCCCCTGAC CAATGACCGG
CGCTACATGA CGGCTGGCCG CTGGCTGTAT GCCAACCGGC TCGCCAAGTT CATCGAGCAA
TGCGGCCTGC ACGGCGCCGT GGTGGCGCGG ATGGAGAAGT ACTTCGATGT GTTCCTCGTG
GACGAGGTCC AGGACTTCGG AGGGCACGAC TTCAACTTCC TGATGGCCAT CAGCGAGGCT
CGCTTGGACA TGACCTTTGT CGGCGACTTC CACCAGCACA CGTTCGACAC GAGTCGTGAC
GGCAACGTCA ACGCAAGCCT TCACGCCGAC TACGGCGCCT ACAAGAAGAA GTTCGAGCGG
GCTCGGCTGA ACGTCGACAC CGACAGCCTC AAGCGGAGCC GCCGGTGCAG CAAGAGCGTC
TGTGACTTCA TCACGCAGAT GATCGGCATC GAGATCGAGT CGCATGACGA GCGGGCCAGC
GTGGTGCGAT TCGAAGACGA TCCAACCGCA GTGGCCGCTC TCTTCGAAGA TCCGGCGACA
GTCAAGCTGT TCTACAAGGA GCACTACAAG TACGGCTGCT TCTCGCAGAA CTGGGGCGCT
TCGAAGGGCA TGGACAGCTA CGGAGATGTG TGTGTAGCCC TGAATCCAGG GAACGTGAAG
GCGTGGCAAG CCAGCAGCTT CCGCACAATC AACCCGGAGA CACGCAACAA GCTGTACGTT
GCCTGTTCCC GGGCGAGGGG CAAGCTCACC TTCGTCCCCG AGTCACTGCT GAAGGCCTGC
AGGCGCTCCT GA
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| Protein sequence | MDKRVVFAVA GSGKTTSLIA ALDEVRRFLL VTYTDANHDN LRAKVIERFG YVPPNIAIYT
YFSFLHSFCY RPFLRSKKGT RGITFSTPER FPNYPLTNDR RYMTAGRWLY ANRLAKFIEQ
CGLHGAVVAR MEKYFDVFLV DEVQDFGGHD FNFLMAISEA RLDMTFVGDF HQHTFDTSRD
GNVNASLHAD YGAYKKKFER ARLNVDTDSL KRSRRCSKSV CDFITQMIGI EIESHDERAS
VVRFEDDPTA VAALFEDPAT VKLFYKEHYK YGCFSQNWGA SKGMDSYGDV CVALNPGNVK
AWQASSFRTI NPETRNKLYV ACSRARGKLT FVPESLLKAC RRS
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