| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1909 |
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| Symbol | |
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| ID | 6160149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2066357 |
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| End bp | 2067226 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664672 |
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| Product | nicotinate-nucleotide pyrophosphorylase |
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| Protein accession | YP_001790941 |
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| Protein GI | 171058592 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
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| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.164745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTG CCGCCCGATT GCCCGCCGAC CTCGCTCTCA ATGTCCAGAT CGCGCTTGCC
GAGGACCTCG GATCCGGCGA TGTCACTGCG CTACTGGTCG ATCCGTCTCA GACGGCGAGC
GCCCGCATCG TCAGCCGCGA GGCGGCCGTG CTGTGCGGAC AGGCCTGGGT CGACGCCGTC
TTCCGTGCCC TGCAGCCCGG CATGCGCATC GATTGGGCCG TGCCCGAAGG CGCTTCGGTG
GCCCCCGATC AGGTGGTCTG CCTGCTCAGC GGCAGCGCCC GCGCGCTGCT GACCGGCGAG
CGCACGGCGC TCAATTTCCT GCAGACGCTG TCGGGCACTG CAACGTCCGT GCGCCGCTAT
GTCGATGCCG TGCTCGGCAC CGGCACCCGC ATCGTCGATA CCCGCAAGAC CTTGCCCGGC
CTGCGCAATG CGCAGAAATA TGCGGTGGTG TGCGGCGGCG GACTGAACCA CCGCATCGGC
CTCTACGACG GCATCCTGAT CAAGGAAAAC CATGTCTCCG CTGCCGGCGG CCTGCGCGAA
GCCATCTGGC AGGCTCGTGC GCTGGGCCTG TCGGTGCCGC TGATGACCGA AGCCGAGACG
CTGGCGGAAG CGCGCATCGC GCTCGATGAA GACGTCGATC TGCTGCTGGT CGACGATTTC
GAACTCGACG ACATCCGCAC CGCCGTGGCG CTGGTGCGCG AACACCGTGC CTGTGGCGGC
AAGACCTTGA TCGAGTATTC CGGCGGTGCC ACCCTGGAAA CCGTGCGCGC GCTGGCTGAG
ACCGGCGTCG ACCGGATTTC GGTGGGCGCC ATCACCAAGC ACTTGCGGGC ACTCGACCTC
TCGATGCGCT TCACCGCCAG CGGCGAGTGA
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| Protein sequence | MTTAARLPAD LALNVQIALA EDLGSGDVTA LLVDPSQTAS ARIVSREAAV LCGQAWVDAV
FRALQPGMRI DWAVPEGASV APDQVVCLLS GSARALLTGE RTALNFLQTL SGTATSVRRY
VDAVLGTGTR IVDTRKTLPG LRNAQKYAVV CGGGLNHRIG LYDGILIKEN HVSAAGGLRE
AIWQARALGL SVPLMTEAET LAEARIALDE DVDLLLVDDF ELDDIRTAVA LVREHRACGG
KTLIEYSGGA TLETVRALAE TGVDRISVGA ITKHLRALDL SMRFTASGE
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