| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1890 |
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| Symbol | glgA |
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| ID | 6159917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2043435 |
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| End bp | 2044898 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664652 |
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| Product | glycogen synthase |
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| Protein accession | YP_001790922 |
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| Protein GI | 171058573 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.601172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCC TGCAAGCCTG TGCCGAGATC TTTCCCTTGC TCAAGACCGG CGGGCTTGCC
GACGTGGCGG GGGCCCTGCC GCCCGCGCTG CGTGCGCTCG GCGCCGAGGT GCGGGTGGTG
GTACCGGGGT TCCCGGCCAT CCTGGCCGGG CTGGTCGACG CCATCGAGGT GGCGCGGCTG
GAGCCGCCTC CGGCGATGGT CATGGCGCGT GGCGCGCGGC TGCTGTACGG TCGGCTGCCG
GCCTGCGATG TCGACGCCTA CGTGATCAAC TCGCCCGACC ACTATCACCG CGACGGCGGC
CCCTACAACG ATGCCCGCCA GCATCCCTAC GACGACAACC ACCTGCGCTT CGGGCTGCTG
GGCTGGGTGG CGGCCAAGCT GGCCGACGGC CTCGATCCGT ACTGGGCACC GCGCGTGGTG
CATGCGCACG ACTGGCATGC CGCGCTGGCA CCGGCGTATC TGCGTGCGCT CGAATGGGCA
CGTGGCCGGC GCCTGGCAGG CAGCGTCTAC ACGGTGCACA ACCTCGCGTA CCAGGGTTTT
TTCCCCGCCC ATCATTTCGG TGATCTGGGC CTGCCCGCGG CCTACAACCA GGTCCACGGC
CTGGAGTTCT ACGGCCAGAT CAGCTTCATG AAGGGCGGCC TGTACTTCGC CGACCGCATC
ACCACCGTCA GCCCGACCTA CGCCCGCGAG ATCCAGGGCG CCGAGCAGGG CTGCGGTCTC
GACGGCCTGC TGCGCGACCG CGATGCCGAC CTGAGCGGCA TCCTCAACGG CGTCGACGAT
GCGGTCTGGA ATCCGGCCGG CGATGCCCTG ATCCCCGCCA CCTACACCCG CCGCAAGCTC
ACCGGCAAGG CGCAATGCAA GGCGACGCTG CAGGCGGAAC TCGGCCTGGC CGAAGATCCC
GCCGTGCCGC TGCTGTGCGT GGTCAGCCGC CTGACCGAGC AGAAAGGCCT GCACCTGGTG
CTGCAGGCGC TGCCGGCGCT GATCGAGCGC GGCTTCCAGT TCGCCCTGCT CGGCAGCGGC
GACGCCGGCA TGGAAAACGA GTTCCGCCGC CTCGCCGAGC AGCATCCGAC GGCGGCGGCG
GTGCGGCTGG GCTACGACGA GGCCTTCGCC CACCGGCTGA TCGCCGGCAG CGACCTGATC
CTGGTGCCGT CGCGTTTCGA GCCCTGCGGC CTGACGCAGC TCTACGGCCT CAAGTACGGC
ACCCTGCCGG TCGTGCGCCG GGTCGGCGGC CTGGTCGACA CCGTGGCCGA CGCCCGGCTC
GAGACGCTCG ACCACGACGC CACCGGCTTC GTCTTCGATG ACTTCAGTGC CGACGGCCTG
ATCGGCGCCT GCCTGCGCGC CAAGGCGCTG TTCCGCCGCC GTGCCGACTG GCTGCAGGTG
CAGCGCCGCG GCATGCAGCA ACCCTTCGGC TGGGAAGACT CGGCGCGGCA GTACCTCAAG
CTCTACCAGC AGGTGGCCGC CTGA
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| Protein sequence | MRILQACAEI FPLLKTGGLA DVAGALPPAL RALGAEVRVV VPGFPAILAG LVDAIEVARL
EPPPAMVMAR GARLLYGRLP ACDVDAYVIN SPDHYHRDGG PYNDARQHPY DDNHLRFGLL
GWVAAKLADG LDPYWAPRVV HAHDWHAALA PAYLRALEWA RGRRLAGSVY TVHNLAYQGF
FPAHHFGDLG LPAAYNQVHG LEFYGQISFM KGGLYFADRI TTVSPTYARE IQGAEQGCGL
DGLLRDRDAD LSGILNGVDD AVWNPAGDAL IPATYTRRKL TGKAQCKATL QAELGLAEDP
AVPLLCVVSR LTEQKGLHLV LQALPALIER GFQFALLGSG DAGMENEFRR LAEQHPTAAA
VRLGYDEAFA HRLIAGSDLI LVPSRFEPCG LTQLYGLKYG TLPVVRRVGG LVDTVADARL
ETLDHDATGF VFDDFSADGL IGACLRAKAL FRRRADWLQV QRRGMQQPFG WEDSARQYLK
LYQQVAA
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