| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1880 |
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| Symbol | |
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| ID | 6160290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2031892 |
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| End bp | 2032272 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664642 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_001790912 |
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| Protein GI | 171058563 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3215] Tfp pilus assembly protein PilZ |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0639562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATT CCGCCTTGCG TCCCCTCACC AGCGCTGCGA CCCCCCGGCC GAGCGTGATC
CAGCTGGTCT TTCGCGAAAA AGGCGCGCTC TACGCGGCCT ACATCCCGCT GTTTTCCGAA
GGCGGGCTGT TCGTGCCGAC CACCCGCGAA TACCGGCTCG GCGAGGATGT CTACCTGCTG
CTGACGCTGC CCGACGACCC GCAGCGCTAC CCGGTGGCCG GCAAGGTGGC GTGGCTGACG
CCCGTCAACG CATCCGGTGG CCGCACGCAG GGCGTGGGGG TGCGTTTTCC GCTCGACGAG
AAGACCCGCG CGCTGCGGGT GCGCATCGAA GAGACCCTGG GCACCGCGAT CCAGTCGGCC
AAGCCCACCC AGACCATCTG A
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| Protein sequence | MSDSALRPLT SAATPRPSVI QLVFREKGAL YAAYIPLFSE GGLFVPTTRE YRLGEDVYLL
LTLPDDPQRY PVAGKVAWLT PVNASGGRTQ GVGVRFPLDE KTRALRVRIE ETLGTAIQSA
KPTQTI
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