Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1875 |
Symbol | |
ID | 6160375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2027625 |
End bp | 2027975 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641664637 |
Product | hypothetical protein |
Protein accession | YP_001790907 |
Protein GI | 171058558 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0628045 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGGCG TCGAGCTCTA CGTGTATTAC CGCGTCGCTG CGGCCGACGA GGCGCTGGCC TGCGCGCAGG TGCAGGCGCT GCAGCAGCGG CTCGGCGTCG AGCTGCCCGG CCTGCAGGCG CGCCTGCTGC GCCGTGGCGC GGACGGCTCG TCGACCGGTG CCGAGCCGGG TGGGCTGTCC ACCTGGATGG AAACCTACCG CCACGCCGAC GGCCTGGGCG GCGATCGGCT CGCGCTGATC CGCCAGGCGG CGCTCGACGT TCCGAGCGTG CGTGTGGGCA CCCGTCACGA AGAATGTTTC GAGCCCGTCG ACCGCGCCCT GGCGGGCGGC ACGGCGGCGC CGGAGCACTG A
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Protein sequence | MSGVELYVYY RVAAADEALA CAQVQALQQR LGVELPGLQA RLLRRGADGS STGAEPGGLS TWMETYRHAD GLGGDRLALI RQAALDVPSV RVGTRHEECF EPVDRALAGG TAAPEH
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