Gene Lcho_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1875 
Symbol 
ID6160375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2027625 
End bp2027975 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content74% 
IMG OID641664637 
Producthypothetical protein 
Protein accessionYP_001790907 
Protein GI171058558 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0628045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGGCG TCGAGCTCTA CGTGTATTAC CGCGTCGCTG CGGCCGACGA GGCGCTGGCC 
TGCGCGCAGG TGCAGGCGCT GCAGCAGCGG CTCGGCGTCG AGCTGCCCGG CCTGCAGGCG
CGCCTGCTGC GCCGTGGCGC GGACGGCTCG TCGACCGGTG CCGAGCCGGG TGGGCTGTCC
ACCTGGATGG AAACCTACCG CCACGCCGAC GGCCTGGGCG GCGATCGGCT CGCGCTGATC
CGCCAGGCGG CGCTCGACGT TCCGAGCGTG CGTGTGGGCA CCCGTCACGA AGAATGTTTC
GAGCCCGTCG ACCGCGCCCT GGCGGGCGGC ACGGCGGCGC CGGAGCACTG A
 
Protein sequence
MSGVELYVYY RVAAADEALA CAQVQALQQR LGVELPGLQA RLLRRGADGS STGAEPGGLS 
TWMETYRHAD GLGGDRLALI RQAALDVPSV RVGTRHEECF EPVDRALAGG TAAPEH