| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1824 |
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| Symbol | |
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| ID | 6163858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1972646 |
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| End bp | 1973674 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664586 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001790856 |
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| Protein GI | 171058507 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00672926 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACAGC GCCCACCCAA TCCCACCTGG ACGGCCGGCC TGTGCGCCGC CGCCCTCGCC
TTGTGCAGCG TCGGCGCGCC GGCCCAGGCA CAGCCGTCGA GTGCCGCGGC GCCGATCGTC
AATGTCGAGC GGCTCGAGCA CGGCCTGAAG GCGCTCGAGC TCGGCGCCGG TGTCTACGTG
GTCGAAGGCG CGAACGCCGA TTTCAGCGTC GCCAACGGCT GCAACATCAT CAACACCGGC
TTCATCGTCA CCGATGCCGG CGTGCTGGTG ATCAACACCG GACCGGGGCG GATCTACGGC
GAGCAGCTGC GCGCGCTGAT CGCGCGCACC ACGCCGCAGC CGGTGGTGCA GGTGCTGCAC
CTGAACCTGC ACCCCGACTA CTTCCTCGGC AACCAGGCCT TTGCCGACGT GCCGCGCCGC
GCGACCGCGC TGACCGGCGC GGGCATGGCG CGCGAGGCCG CCGGCTACGA GACCAACCTC
TATCGCCTGT GTGGCGACTG GATGAAGGGC ACGCAGGCGC TGCAGCCCGA TGCGGCGGTG
GCGGTCACGC CGGGCGGCGG CACGCTGCGC ATCGGCAGCC GCGAGTTCGC GCTGCACGAG
CTCGACGGCC ACACCGACTC CGACCTGGTG CTGATCGACC GCCGCAGCGG CGTCGCCTTC
GTCGGCGGGC TGGTGTTCGT CGACCGCATC CCGACCACGC CGCATGCGCG AATCGGCGAC
TGGCAGCGCA GCCTCGACCG GCTACAGCCG CTGCTCGAAA GCGCCGGCGT GAAGACGCTG
GTGCCCAGCC ACGGGCCGGT GCGCGCCAGC CTGGACGGCA TCGCCCAGAC ACGCGGCTAC
CTGCAGTGGC TGGACCGGAA CTTCAGCCTC TGGGCCCGCC AGGGCTGGGA GATGAACGAG
GTACTGAAAG CGCCGGTGCC GGCGCTCTAT CGCGGCTGGG CGGCGTTCGA GACCGAATAC
CTGCGCAACG TCGTGCACCT GTACCCGCGT TACGAGAGCC AGGTGCTGAG CGCCACCCGG
CCGCGCTGA
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| Protein sequence | MKQRPPNPTW TAGLCAAALA LCSVGAPAQA QPSSAAAPIV NVERLEHGLK ALELGAGVYV
VEGANADFSV ANGCNIINTG FIVTDAGVLV INTGPGRIYG EQLRALIART TPQPVVQVLH
LNLHPDYFLG NQAFADVPRR ATALTGAGMA REAAGYETNL YRLCGDWMKG TQALQPDAAV
AVTPGGGTLR IGSREFALHE LDGHTDSDLV LIDRRSGVAF VGGLVFVDRI PTTPHARIGD
WQRSLDRLQP LLESAGVKTL VPSHGPVRAS LDGIAQTRGY LQWLDRNFSL WARQGWEMNE
VLKAPVPALY RGWAAFETEY LRNVVHLYPR YESQVLSATR PR
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