Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1770 |
Symbol | |
ID | 6163619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1905451 |
End bp | 1906242 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641664532 |
Product | hypothetical protein |
Protein accession | YP_001790802 |
Protein GI | 171058453 |
COG category | [S] Function unknown |
COG ID | [COG4340] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000622188 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCTTAC CCGTGCCCTC ATTCACCCAT CCCGAAGCGC TGCACCGCGA GCAGGCCGAC GATGCCGCCG CGCTGCTGCG CAGCCAGGGA TTCGCGCGCC TGGCGCCCGA CGCGCTGGCG CACCTGAGCC ACCAGCCGCT GTCGGCCCTC GGCGCGCTCG CGCCCGCCTG GAACGACCTG CCGCCCGACG CCCACCTGAA GGACGGCGGC CGCTACCGCC GCCGCCGCCA CGGCAGCCTG GTGCAGGACG TCGGCGCCGC CACGCTCGAC AGCGTGCCGC ACCGCGCGCA CTGGCAGCCC ACCACCTACA ACGCGCTGCA CGGCGGCATG CTGCGCTGGT TCGATCCGCT GTCGGCCCAG TTGGCGCAAT CGCCGGCCTT TCTCGACGTG GTGCGCCGGC TCGGCGAGGT GTTCGCCGCC GCGGCCCATC CGACCGACAG CGAGCCGGCC TTCGACGGCC GCTGGTTCGT CGAGGCGCAT GCCTTCCGCA TCGACACCAC CGGCGGCGTC GGCCGGCCGA CACCCGAGGG CGCGCACCGC GACGGCGTCA ACTTCGTGGC CGTGCTGCTG GTCGACCGGG TCGGCGTGGT CGGTGGCGAA ACGCGCGTGT TCGCCGCCGA CGGCCCGCTG GGCGTGCGCT TCACGCTCGA CGAACCGTGG AGCGCGCTGC TGCTCGACGA CGTGCGGGTG ATCCACGAAA GCACCCCCAT CCAGCCCGCC GCACCCGGCG GCCACCGCGA CACGCTGGTG CTGACGTATC GGGCCGGCGG TTTCCAGGAT CCGCCAAAAT GA
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Protein sequence | MSLPVPSFTH PEALHREQAD DAAALLRSQG FARLAPDALA HLSHQPLSAL GALAPAWNDL PPDAHLKDGG RYRRRRHGSL VQDVGAATLD SVPHRAHWQP TTYNALHGGM LRWFDPLSAQ LAQSPAFLDV VRRLGEVFAA AAHPTDSEPA FDGRWFVEAH AFRIDTTGGV GRPTPEGAHR DGVNFVAVLL VDRVGVVGGE TRVFAADGPL GVRFTLDEPW SALLLDDVRV IHESTPIQPA APGGHRDTLV LTYRAGGFQD PPK
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