| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1764 |
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| Symbol | pepN |
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| ID | 6162061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1895970 |
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| End bp | 1898663 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664526 |
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| Product | aminopeptidase N |
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| Protein accession | YP_001790796 |
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| Protein GI | 171058447 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0234005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAAG GCACAAGCAC CGTGGTGCGG CGTGAGGACT ACACCGCGCC GTCGCACTGG
ATCCGCACCG TCGACCTGAC CTTCGACCTC GATCCGGCCA AGACGCTGGT GATCAGCCGC
ATGAGCGTCG AGCCCAACAC CGAGCGCCCC GGCCAGCCGC TGCGCCTCGA TGGCGAGGAC
ATCACGCTCA CGCGCGTGCT GGTCAACGGC GAGAGCATCT CGTTTCGCTT CGAGGGCCAG
CAGCTGGTGC TGGAACACCT GCCGGCCGAG CCGTTCAGCC TCGAGATCCG CAACACCTGC
GCGCCCGAGA AGAACACCGA GCTGTCGGGC CTCTACACCT CGGGCGGCAG CTTCTTCACG
CAGTGCGAGG CACAGGGTTT CCGGCGCATC ACCTATTTCC TGGATCGCCC GGACGTGATG
GCGCTCTACA CCGTGACGCT GCGCGCCAAC GCGAAGGCCT ATCCGGTGCT GCTGTCCAAC
GGCAACCGGG TCGAACACGG CACGCTCGAC AACGGCCGCC ACTTCGCGAC CTGGGTCGAC
CCGCACCCCA AGCCGAGCTA CCTGTTCGCG CTGGTGGCCG GCGCGCTGGT CTGCCGCGAG
CAGTGCGTGC GCAGCCGCTC GGGCAAGGAT CACCTGCTGC AGGTCTACGT GCGCGCCGGC
GACCTCGACA AGACCGAACA CGCGATGAAT TCGCTGATCG CCTCGGTGGT GTGGGACGAA
GCCCGCTTCG GCCTGAGCCT GGACCTGGAG CGCTTCATGA TCGTCGCGGT GAGCGACTTC
AACATGGGCG CGATGGAGAA CAAGGGGTTG AACATCTTCA ACACCAAGTT CGTGCTCGCC
AACCCGGCCA CCGCCACCGA CACCGACTAC GCCAACATCG AGGCGGTGGT CGGCCACGAA
TACTTCCACA ACTGGACCGG CAACCGTGTG ACCTGCCGCG ACTGGTTCCA GTTGAGCCTG
AAGGAAGGCC TGACCGTCTA CCGCGACCAG GAGTTCAGCC AGGACATGGC CGGCGTGGCC
TCGGCGCGCG CGGTCAAGCG CATCGAGGAC GTGCGCCAGC TGCGCCAGAT GCAGTTCCCC
GAGGACGCCG GCCCGATGGC GCACCCGGTT CGGCCCGAGC AGTACCAGGC GATCGACAAC
TTCTACACCA CCACCGTCTA CGAAAAGGGC GCCGAGGTGG TGCGCATGAT GGCGACGCTG
GTCGGCCGCG AGGGTTTCCG CCGCGGCATG GACCTGTACT TCGCCCGCCA CGACGGCCAG
GCCGTCACCT GCGACGACTT CGCCCAGGCG ATCGCCGACG CCAACCCGGG CAGCGACCTG
GCGACCCGGC TCGACAGCTT CAAGCGTTGG TACAGCCAGG CCGGCACGCC CCGCGTGAGC
GCCAGCGGCC ACTACGACCC GGGCGCCGGC ACCTACACCG TCACGCTCGC CCAGCACACG
CCGGCCACGC CCGGCCAGCC GGTCAAGCTG CCGTTCGTGA TCCCGGTGGC GATGGGCCTG
CTCGACTCCG ACGGCCGCCC TCTGCTGCTG CAGCTCCAAG GCGAATCCCA GTACGGCGGC
ACCGAGCGCG TGCTGGTGCT CGAACAGGCG AACCAGGCGT TCGTCTTCAC CGGCCTGTAC
GGCCTGACCG GCGAGCCGGT GCCGTCGCTG CTGCGCGGTT TCTCGGCGCC GGTGATCCTC
GAATGGGCGG CCACCGAGCG GCAGCTGTTC ACGCTGCTGC ACCACGACAC CGACCCGACC
AACCGCTGGG AAGCCGCCCA GCGCCTGGGC CTGCTGCGCC TGATGGGCGC CGTGCAGTCG
GGCCGGCCGC TGCAGCTCGA CGCCGCCTAC ATCGACGCGC AGCGCGCCGT GCTGCGTGAT
CCCTCGCTCG ACGCCGCCTT CAAGGACCTG CTGCTGACAC CGCCCAGCGA AGGCTACGTC
GCCGAGCAGC TGGCTGCCGC CGGCGTGCCG GTCGACCCGC CGGCCATCCA CGCCGCGCGC
GAGGCGATGC GCAGCCAGCT CGCCCAGGCG CTGTTCGACG ACTGGGTCTG GGCCTTCGAG
GCGCACCACG ACAACGGCGC CTATCGCCCC GATCCGGTCT CGACCGGTCG GCGCGCGCTC
GCCAACCTGG CGTTGGCCCA CCTGGTGCTG GACGCCGGCC GCAGCGGCGA TCCGGTCTGG
CCGGGACGGG CCTATCAACG GGTCCAGGAT GCCGGCAACT TCACCGACCG CCAGGGCGCG
CTGATCGCGC TGCTGGGCGC CCACCACGCG CTGGCCGAGC TGGCGCTGGC GCGGGTGCAC
GCCCAGTTCA AGCACGAGGC GCTGGTGATC GACCGCTGGT TCGCACTGCA GGCCGGCGCA
CCCGAGCGCG ACGGACAGGT GTTCCAGCGC ATCAAGACGC TGGTGCATCA CCCCGATTTC
CTGGTGCGCA ACCCGAACCG CGCCCGCAGC GTGCTGACCA CGCTGTTCCA CCTCAACCCC
TCGGCGCTGC ACCGCGCGGA TGCGGCCGGC TACGTCTTCT GGGCCGAGAA GGTGGTGGAG
GTGGACGCCT TCAACCCGCA GCTCGCCGCC CGACTGGCGC GCGGCCTGGA CCGCTGGCGC
GTGCTGGCCG AACCCTACCG CAGCGCGGCC CACGAGGCGC TGTGCCGCGT CGCCGCCCGC
ACCGAACTGT CGCCCGACAC CCGCGAGATC GTGGGTCGTT CGCTGGCCGA CTGA
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| Protein sequence | MREGTSTVVR REDYTAPSHW IRTVDLTFDL DPAKTLVISR MSVEPNTERP GQPLRLDGED
ITLTRVLVNG ESISFRFEGQ QLVLEHLPAE PFSLEIRNTC APEKNTELSG LYTSGGSFFT
QCEAQGFRRI TYFLDRPDVM ALYTVTLRAN AKAYPVLLSN GNRVEHGTLD NGRHFATWVD
PHPKPSYLFA LVAGALVCRE QCVRSRSGKD HLLQVYVRAG DLDKTEHAMN SLIASVVWDE
ARFGLSLDLE RFMIVAVSDF NMGAMENKGL NIFNTKFVLA NPATATDTDY ANIEAVVGHE
YFHNWTGNRV TCRDWFQLSL KEGLTVYRDQ EFSQDMAGVA SARAVKRIED VRQLRQMQFP
EDAGPMAHPV RPEQYQAIDN FYTTTVYEKG AEVVRMMATL VGREGFRRGM DLYFARHDGQ
AVTCDDFAQA IADANPGSDL ATRLDSFKRW YSQAGTPRVS ASGHYDPGAG TYTVTLAQHT
PATPGQPVKL PFVIPVAMGL LDSDGRPLLL QLQGESQYGG TERVLVLEQA NQAFVFTGLY
GLTGEPVPSL LRGFSAPVIL EWAATERQLF TLLHHDTDPT NRWEAAQRLG LLRLMGAVQS
GRPLQLDAAY IDAQRAVLRD PSLDAAFKDL LLTPPSEGYV AEQLAAAGVP VDPPAIHAAR
EAMRSQLAQA LFDDWVWAFE AHHDNGAYRP DPVSTGRRAL ANLALAHLVL DAGRSGDPVW
PGRAYQRVQD AGNFTDRQGA LIALLGAHHA LAELALARVH AQFKHEALVI DRWFALQAGA
PERDGQVFQR IKTLVHHPDF LVRNPNRARS VLTTLFHLNP SALHRADAAG YVFWAEKVVE
VDAFNPQLAA RLARGLDRWR VLAEPYRSAA HEALCRVAAR TELSPDTREI VGRSLAD
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