| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1723 |
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| Symbol | |
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| ID | 6162498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1839079 |
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| End bp | 1839942 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664483 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_001790755 |
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| Protein GI | 171058406 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000026328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTGAGCC TGTCCCCTTC CCGCACCCTG AAATCCCTGC TGACCTGCGC GCTGCTCACC
TTCGGAGCCT TGTCGCATGC GCAGCAGGTG TTTCGCGTCA CCGCCATCCC CGACGAGTCG
CCCACCGAGC TGGCACGCAA GGCTGCGCCG CTGGTCAAGT ACCTCGAAGG CAAGCTGGCG
ATGAAGGTCG AGTTCACGCC GGTGACCGAC TACGCCGCGG CGGTCGAGGT GCTGATCAAC
AAGAAGGTCG ACATGGCCTG GTTCGGCGGC TTCACCTTCG TGCAGGCCAA CGTGCGTTCG
GGCGGCAAGG TGATCCCGCT GGTGCAGCGC GAGGAAGACG AGAAGTTCCG TTCGGTCTTC
ATCACCAGCG ATCCGACCAT CCAGGGCCTG GCCGACCTGA AGGGCAAGGA CGTCAGCTTC
GGATCCCAGA GCTCGACCTC CGGCCACCTG ATGCCGCGCA GCTTCCTGCT GCAGGCCAAG
GTCGATCCGG ACAAGGATTT CAAGCGCGTG GCCTACAGCG GCGCGCACGA CGCGACGATC
GCCGCCGTGG CCTCGGGCAA GGTGCAGGCG GGTGCGCTGA ACATCTCGGT GTGGGACAAG
TTCGTGGCCG ACAAGAAGGT CGACACCGCC AAGGTGCGGG TCTTCTACAC CACGCCGCCG
TACTACGACT ACAACTGGTC GGTGCACGCC GACATGCCCG TCGCCCTGCG CGAGAAGCTC
AGCGCCGCGC TGCTCGCGCT CAGCCGCGAC ACCGCCGAGG GCAAGGAAGT GCTCGACCTG
CAACGCGCCA CCCGCTTCGT GCCGAGCAAG GCCGACAACT ACAAGGGCAT CGAGGCCGCC
GCACGCAGCG CCGGCCTGCT CTGA
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| Protein sequence | MLSLSPSRTL KSLLTCALLT FGALSHAQQV FRVTAIPDES PTELARKAAP LVKYLEGKLA
MKVEFTPVTD YAAAVEVLIN KKVDMAWFGG FTFVQANVRS GGKVIPLVQR EEDEKFRSVF
ITSDPTIQGL ADLKGKDVSF GSQSSTSGHL MPRSFLLQAK VDPDKDFKRV AYSGAHDATI
AAVASGKVQA GALNISVWDK FVADKKVDTA KVRVFYTTPP YYDYNWSVHA DMPVALREKL
SAALLALSRD TAEGKEVLDL QRATRFVPSK ADNYKGIEAA ARSAGLL
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