Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1721 |
Symbol | |
ID | 6162496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1837377 |
End bp | 1838225 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641664481 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001790753 |
Protein GI | 171058404 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000000186214 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACGCCG TCGTGCCCCG TCGCGCCGCG CCCGGCGTGC CATCGCGCGA TCCGGCCTGG CTGGCGCGAC TGTTCTGGAT CGGCGCGGCG CTGGTGCTGC TGTGGCCGCT GGGCGTGGCC ACCGAGTTCC GGCCCTGGGT GCTGCTGGAA CCCGACAACC TCAAGCTCAG CGCCGGTTTC ATCGGCAGCT TCTTCCCGCC GGCGGTCGAG CCCGATTTCC TGCTGATGGT GGCGCGCGAG ACCTGGCGCA CGGTCGCCAT CGCCACCGCC GGCATCTCGC TGGCGCTGCT GCTGGCACTG CCGCTGACGC TGCTGTCGAC GCGTGCGCTG TCGATCTCGG CGCTGTCGGG GCGCATGGCG CGGCTGCCGT TCTGGATCCG CCAGACGCTG CGTGGCGTGA TGATCGTGCT GCGCAGCGTG CCCGAGCTGG TCTGGGCGCT GGTGTTCGTG CGGGTGGTCG GCCTCGGCCC CACCGCCGGC GTGCTGGCGA TCGCGCTGAC CTACGGCGGC ATGCTCGGCA AGGTCTACGG CGAGATCCTC GAGAGCGGCG AGGCCCAGCC CACCGAGGCG CTGCTGCGCA ACGGCAGCGG CCGGCTGCAG GCGTTCTTCT ACGGCCTGCT GCCGCAGAAC GCCGCCGAGC TGACCTCGTA CACCGTCTAC CGCTGGGAGT GCGCGATCCG CTCGTCGGTG GTGCTGGGTT TTGTCGGCGC CGGCGGGCTG GGCCAGCAGC TCGACAGCTC GATGAAGATG TTCGCCGGCG GCGAGATCGC GACCATGCTG CTGGTGTTCA TCGCGCTGGT CGCGCTGGCC GACCGGGTCA GCAGCTGGCT GCGCCGCTCG CTGGGCTGA
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Protein sequence | MNAVVPRRAA PGVPSRDPAW LARLFWIGAA LVLLWPLGVA TEFRPWVLLE PDNLKLSAGF IGSFFPPAVE PDFLLMVARE TWRTVAIATA GISLALLLAL PLTLLSTRAL SISALSGRMA RLPFWIRQTL RGVMIVLRSV PELVWALVFV RVVGLGPTAG VLAIALTYGG MLGKVYGEIL ESGEAQPTEA LLRNGSGRLQ AFFYGLLPQN AAELTSYTVY RWECAIRSSV VLGFVGAGGL GQQLDSSMKM FAGGEIATML LVFIALVALA DRVSSWLRRS LG
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