Gene Lcho_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1661 
Symbol 
ID6162134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1770679 
End bp1771323 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content73% 
IMG OID641664415 
Productnitroreductase 
Protein accessionYP_001790693 
Protein GI171058344 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.923365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAG CGCCGGATCC GCACCGCAGC TCGCCCGCCC GTCCTGTCGA CCCGGCGTCC 
GGCGGCGCCG AGTTCGTCGA CTGGACGCAG GCGCTGATCC ACACCCGCCA GAACGTCGCG 
CCGCGCCGCC TGGTCGAGCC CGCGCCGACA CACGAGGAAT GCGCCCGCCT GTTCGAGGCG 
GCGGCCGCGG CGCCCGATCA CGGCCAGATC CTGCCGTGGC GCTTCGTGAT CGTGCCGGCG 
GCCCGGCGCG CCGATCTGGG CGATGCCTTT GCCGCCGCCT TGCTCGAGCG CGACCCGCAC 
GCCACGCCCG AGCAGATCGC CGATGCCCGC GACAAGGCAG GCCGTGCGCC GCTGCTGATG 
CTGGTGGTGG CGCGCCTGGG GCCGGCCGAA CCCGACATCC CGGCGCTCGA GCGCATGGTG 
GCGATCGGTG CGGCGATCCA GAACCTGCAA CTGCTGGCGC ATGCGATGGG TTACGGCTGC 
GGCCTGACGA GCGGTCGCGC GCTGACGGCC ACGCCCTTGC GCCGTCTTTT CAGCCTGGCC 
GATACCGAAC AGGCGGTCTG CTTCCTCGCC GTCGGCACGG TCAGCCGGCG CAAGCCGATG 
CGCACCCGGC CCTCGCCACG CGATTTCGTC ACCGAACTGG CTTGA
 
Protein sequence
MTAAPDPHRS SPARPVDPAS GGAEFVDWTQ ALIHTRQNVA PRRLVEPAPT HEECARLFEA 
AAAAPDHGQI LPWRFVIVPA ARRADLGDAF AAALLERDPH ATPEQIADAR DKAGRAPLLM 
LVVARLGPAE PDIPALERMV AIGAAIQNLQ LLAHAMGYGC GLTSGRALTA TPLRRLFSLA 
DTEQAVCFLA VGTVSRRKPM RTRPSPRDFV TELA