| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1648 |
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| Symbol | |
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| ID | 6161681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1756624 |
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| End bp | 1758447 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664402 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001790680 |
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| Protein GI | 171058331 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.459857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGA TCGAAGTGCA AGTGCCGGAC ATCGGCGACT TCAAGGACGT GGCGATCATC
GAGCTGCTGG TCAAGCCCGG CGACACGGTG AAGGCCGAGC AGAGCCTGAT CACCGTCGAG
TCCGACAAGG CCTCGATGGA GATCCCCAGC TCGCACGCCG GCGTGATCAA GGAACTGCGC
GTCAAGCTCG GTGACAAGAT CAACCAGGGC GACGTGCTGC TGACGCTGGA AGCCGCAGGC
GCTGCGGCGC CGGCTGCTGC GCCTGCTCCG GCACCGGCCG CGGCTGCTCC GGTGGCCGCA
CCGGCACCGG TTGCCGTGGC GGCCGGCCCG GCCGGCAGCT ACAGCGGCGC GGCCGATGTC
GAGTGCGACC TGCTCGTGCT CGGCGCCGGC CCCGGCGGCT ATTCGGCGGC GTTCCGCGCA
GCCGATCTGG GCCTCAAGGT CGTGATCGTC GAGCGTTACG CGACGCTCGG CGGCGTCTGC
CTGAACGTCG GTTGCATCCC GTCGAAGGCG CTGCTGCACG TGGCCGCCGT CATGGACGAG
GTCAGCCACC TGGGCGACCT GGGCGTCGAC TTCGGCGCGC CGAGCGTCAA CGTCGACAAG
CTGCGTGGCC ACAAGGAAAA GGTCATCGGC AAGCTGACCG GCGGCCTGGC CGCGATGGCC
AAGATGCGCA AGGTCACGAC CGTGCGCGGC GTGGGCACCT TCCTCGATCC GTACCACGTG
CAGGTCGAAG AAACCGCCGG CACCGGCACC GAGCGGGCCG GCGCGAGCAA GGTCGTGAAG
TTCAAGCACG CCATCATCGC CGCGGGTTCG CAGTCGGTGA AGCTGCCATT CTTCCCGGCG
GACGACCGCA TCGTCGACTC GACCGGGGCG CTCGCACTCC AGGGCGTGCC CAAGAAGATG
TTGATCGTCG GTGGCGGCAT CATCGGCCTC GAAATGGGCA CGGTGTATTC GACGCTGGGC
GCACGCCTGG ACGTGGTCGA GATGCTCGAC GGCCTGATGC AGGGCGCCGA CCGCGACCTG
GTCAAGATCT GGCAGAAGAT GAACGCGCAC CGCTTCGACA ACATCATGTT GAAGACCAAG
ACGGTCGGAG CCGTTGCCAC GCCCGAAGGC ATCAAGGTGC AGTTCGAGGG CTTGGACGGC
ACCAAGACCG AAGGCCTGTA CGACCTGGTG CTTCAAGCCG TGGGCCGCTC GCCCAACGGC
AAGAAGATCG GCGCCGACAA GGCCGGCGTG GCTGTGACCG ATCGCGGCTT CATCAACGTC
GACATCCAGA TGCGCACCAA CGTGCCGCAC ATCTTCGCCA TCGGCGACAT CGTCGGCCAG
CCCATGCTCG CCCACAAGGC GGTGCACGAG GCGCATGTGG CCGCCGAGGT CATCGCCGGC
ACGCTGCAGG GCAACCAGGA GCTGGCCTCG GCCGCCTTCA ACGCCCGCGT GATCCCGAGC
GTGGCCTACA CCGACCCTGA AGTGGCGTGG GTGGGCCTGA CCGAAGATCA GGCCAAGGCG
CAGGGCATCA AGGTCAAGAA GGGCCTGTTC CCGTGGACGG CGTCGGGCCG CGCCATCGCC
AACGGCCGCG ACGAGGGCGT GACCAAGCTG CTGTTCGACG ATTCGCCCGA GGCCCACGGC
CACGGCAAGA TCCTTGGCGG CGGCATGGTC GGCACGCATG CGGGCGACAT GATCGGCGAG
ATCGCGCTGG CGATCGAGAT GGGCGCCGAC GCGGTCGACA TCGGCAAGAC CATCCACCCG
CACCCGACGC TCGGCGAGAG CATCGGCATG GCCGCGGAAG TGGCGCACGG CAGCTGCACC
GACCTGCCGC CGACGCGCAA GTGA
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| Protein sequence | MALIEVQVPD IGDFKDVAII ELLVKPGDTV KAEQSLITVE SDKASMEIPS SHAGVIKELR
VKLGDKINQG DVLLTLEAAG AAAPAAAPAP APAAAAPVAA PAPVAVAAGP AGSYSGAADV
ECDLLVLGAG PGGYSAAFRA ADLGLKVVIV ERYATLGGVC LNVGCIPSKA LLHVAAVMDE
VSHLGDLGVD FGAPSVNVDK LRGHKEKVIG KLTGGLAAMA KMRKVTTVRG VGTFLDPYHV
QVEETAGTGT ERAGASKVVK FKHAIIAAGS QSVKLPFFPA DDRIVDSTGA LALQGVPKKM
LIVGGGIIGL EMGTVYSTLG ARLDVVEMLD GLMQGADRDL VKIWQKMNAH RFDNIMLKTK
TVGAVATPEG IKVQFEGLDG TKTEGLYDLV LQAVGRSPNG KKIGADKAGV AVTDRGFINV
DIQMRTNVPH IFAIGDIVGQ PMLAHKAVHE AHVAAEVIAG TLQGNQELAS AAFNARVIPS
VAYTDPEVAW VGLTEDQAKA QGIKVKKGLF PWTASGRAIA NGRDEGVTKL LFDDSPEAHG
HGKILGGGMV GTHAGDMIGE IALAIEMGAD AVDIGKTIHP HPTLGESIGM AAEVAHGSCT
DLPPTRK
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