| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1640 |
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| Symbol | |
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| ID | 6161287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1742374 |
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| End bp | 1743438 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641664394 |
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| Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
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| Protein accession | YP_001790672 |
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| Protein GI | 171058323 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0313] Predicted methyltransferases |
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| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0924245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGCAGG CCGCGGCCGC CGCCTGCGCC GGCCAGCAGC ACCCGGCCTC CACACTGTAT
GTGGTGGCCA CGCCGATCGG CAACCTCGCC GACATGACCC TGCGCGCCAT CCACGTGCTG
AGCCTGGTCG ATGCCGTGGC CTGCGAGGAC ACCCGCGTCA CCGCGGTGCT GCTGCAGCGC
CTGGGCCTGC ACAAGCCGCT GCTGGCGCTG CATCAGCACA ACGAGGACGA TGCCACCCCC
GCCGTCGTGG CGCGCCTGGC CCGTGGCGAG CGGGTCGCCT ACGTCAGCGA TGCCGGCACG
CCGGCGGTGT CCGACCCCGG TGCGCGGCTG GTGGCCGGCG TGCACGCCGC GGGTTGGCGG
GTGCTGCCGC TGCCGGGCGC GAGCAGCGTC GTCACGGCCC TGAGCGCGGC CGGCGATGCG
CAGGGCAGCG GCTTCCGTTT CATCGGATTC CTGCCACCCA AGGCGCAGGC GCGCCAGCAG
GCGCTGCGTG CGCTGGCCGA CGAGCGCGCG TCGGTGGTGA TCTTCGAGGC GCCGCACCGC
ATCGAGGCGC TGGCGCAGGC GCTGGCCGAT GAACTGGGCG CGCGCACGCT GACCGTCTGC
CGCGAACTCA CCAAGCAGTT CGAGAGCATC CACACGCTGG CGGCCGCCGA CTGGCCGGCC
TGGCTGGCGG CCGACGACGA CCGGCGCCGC GGCGAGTTCG TCGTGGTGCT GCACGGCCTC
GGCCATGACG ATCTGGCCGA TGAAACCGAG CTGGCGGCCC GTTCGACCGC GCTCGATGCC
TGGCTGCAGG CCCTGCTCGA CGTGATGCCG CTCAAGCAGG CCGTGGCCCT GGCCGCCACC
GCCAGCGGCG TGCCGCGCAA CACGCTCTAC CAGCGCGCGC TGGTGCTGCG TGCCGATCGG
CCCGGGCCGG CCGACGACGC CGACGACATC GAGCCAGGTG CTGCAGCCGC CGCCCGCGTC
GACGCCGGCG AGGGCCACGA TGTCGGCGCG CCGGCGCCGT CCGGCGGCGT GCTGCTGTCG
AGCAGCCAGC CACTTTTGCC ACGTCGCAAA GCCGCTCGGC GATGA
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| Protein sequence | MLQAAAAACA GQQHPASTLY VVATPIGNLA DMTLRAIHVL SLVDAVACED TRVTAVLLQR
LGLHKPLLAL HQHNEDDATP AVVARLARGE RVAYVSDAGT PAVSDPGARL VAGVHAAGWR
VLPLPGASSV VTALSAAGDA QGSGFRFIGF LPPKAQARQQ ALRALADERA SVVIFEAPHR
IEALAQALAD ELGARTLTVC RELTKQFESI HTLAAADWPA WLAADDDRRR GEFVVVLHGL
GHDDLADETE LAARSTALDA WLQALLDVMP LKQAVALAAT ASGVPRNTLY QRALVLRADR
PGPADDADDI EPGAAAAARV DAGEGHDVGA PAPSGGVLLS SSQPLLPRRK AARR
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