| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1573 |
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| Symbol | |
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| ID | 6163272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1672001 |
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| End bp | 1672420 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664327 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001790605 |
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| Protein GI | 171058256 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.320463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCTTTG CCAGTTTTGA GCGCCAGCAC AGCAGCGCGC CGATGTCCGA GATCAACATG
GTGCCGTTGA TCGACGTGAT GCTGGTGCTG CTGGTGATCT TCATCGTCAC CGCGCCGCTG
CTCACGCACG CGGTCAAGCT CGAGCTGCCG CAGGCGAGCA GCCAGCCGGT CACGCCGGTG
GCCGACAAGA TCGAGATCGC CATCGACGCC CAGGGCCAGC GCCACTGGAA CGGCGAGCCG
CTGGGCCGCG AGCAGCTGGC GCAGCGCTTC ATCGCCGCTG GCCAGGACGG CCGCCAGCCC
GAGATCCACC TGCGCGCCGA CCAGGACGCG GCCTATCGCC ACGTGGCCCA GACGCTGGCC
GATGCGTCGG TGGCGGGGCT CAAGAAGATC GGTTTCGTGA GCCAGCCCAC GCCACCTTGA
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| Protein sequence | MAFASFERQH SSAPMSEINM VPLIDVMLVL LVIFIVTAPL LTHAVKLELP QASSQPVTPV
ADKIEIAIDA QGQRHWNGEP LGREQLAQRF IAAGQDGRQP EIHLRADQDA AYRHVAQTLA
DASVAGLKKI GFVSQPTPP
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