| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1564 |
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| Symbol | |
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| ID | 6163420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1661603 |
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| End bp | 1665070 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664318 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790596 |
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| Protein GI | 171058247 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4717] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG ACCAGCTCGA CCTCGTCCGC TACGGCAAGT TCACCGACCG CTCGATCGCG
TTGCCGCGTG CCGAGCGCGA TTTCCACGTC ATCGTCGGCC CCAACGAGGC CGGCAAGTCG
ACCGTGCGCA CCGCCGTGCT CGACCTGCTG TACGGCATCC CGATGCGCAC CACGCATGCG
TTTGCGCACG CGATGTCCGA CATGCGGCTG GGTGCGCGCA TCGAACACGA CGCCCGCACG
CTCGCCTTTC ACCGCACCAA GGGCAACAAG CAGACGCTGC GCAGCCCCGC CGATGCGGTG
CTGCCCGACA ACGTGCTGGC GCCGTTTCTC GGCAGCACCG ACCGCGATTT CTTCGCGCAG
ATGTTCGGGC TCGACCACGG CCGGCTGATC AAGGGTGGGC ACGACATCCT GTCGGCGTCC
AACGACCTGG GCCAGATCCT GTTCCAGTCG GCGGCCGGCA TCGGCAGCTT GGGCGCGGTG
CGCGCTGCGC TCGAAGCCGA GGCCGACAAG CTGTGGGCCA AGCGCCGGTC GAACGACCGG
GCCTACTACA TCGCCGCCGA CGCGCTCGAC CGCGCCACCG CCGCGCTGAA GTCCGCCACC
GTGCGTACCA AGGACTGGGC CGAGGCGCAG GCCAAGGTGA CGGCGCTCGA TGTCGCACAT
GAAGACACGC GCCGCCAGCA CGCCGAGGTC CGCTCGCGCC GCAACCAGAT CGAACGCATG
CGCCGCGTCA CGCCGCACCT GAACGCGCTG GCCGACGCCC GTGCGCGGCT GGCCGAGCTC
GGCCCGGGCG TCGAGTTGCC CGACAACGCG GCCCGCACGC TGCAGGACGC CGAGCGTGTC
ATGCACGTCG CCCAAGCCGA GATCGACCAC CAGACCGGCG TGCTGACCGA GGCCCAGGTG
GCGCTCGACG CGGTGCAGGT CGACCACCGC ATCCGCGAGC TGGCCACCGA GATCACCGAG
CTTGACGACC AGCGCCTGCA ATACCGCGCC TACCCCGGCG ACATCGCCCG CCGCGAGGCC
GAGATGGACG CGCAATGGCG CATCGCCGCC GACCTGGCCG CCGGGCTGGG CTGGGACGCG
GCCGGCGCCG AGGCCTTGCG CGCGGCCATC CCGGTGGCGT CGGTGCGGGC GAGCCTGCGG
CGGCTGATCC GCGCCCATGC CGGCCTGCGC CAGAGCTGCG ACATGGCCGT GCGGGCCGAG
AAGCTCAAGC GCGCCGAGCT GGCGCAGGCG CGGGCGGTGC TCGCCGGACT GGCCTCGGCC
GAAGCGGCGC CCGGCCTGCA GGCCGCGCTC GGGCAGGCGC AGAAGCTGGG GGATTTCACG
GCTGTCGAAC GCGAGCGCGA GCTGGCCGTG CGCAAGTGCG AGCAGGCCCT GGCCGATGCA
GGCGCCGCGC TCGGCGCCTG GCGGGTCGAG ATCGGCCCGC TGCGCGCGAT GGCCGTGCCG
GCCGCCGACA CGGTCCGCGC GCTGGCCCAG GAGCAGCTCG CCGATGACGC GCAGGCCCGC
GCCGTCGCCA CGCGCATTCA GGCGCTGACG CGCCAGCTCG ACGCGGCGCA GCTGGAGGTC
ACGCACTACC GCCAGGCGCA CGAGCCCGTC ACGCGTGACG AGGTGGTGTC GGCGCGGCTG
CAGCGCCTGA GCGCGTGGTC GGAGATCAAG ATCCGGCCGC AGGAGCTGGC ACAGCGGGCC
GAGGGGTTCG AGCGCCTGGT CGAATCGGCC GATGCGCTGG CCGACCGCCG CCACGACACC
GTGCAGCAGG CCGAGGCCCT GATCGGCAAG CAGGCGCAGG TCGAGCGGCT GGCGCAGGAG
CGGGCGTCGG TGCAGGCTGA GGCCGACGCG CTGGCCGCCG CCCGCGAGGC GAGGGCGCGG
CGCTGGTCGG ACCTGACCGC CGCCTGCGGC CTGCCGTCAC AGCCACCCCT GCCGTTCGAC
GCCGCGGGCC CCTGGCTCGA AGCGCGCAGC GCGACGCTCG CCGCCTGGGA TCGGCTCGAA
GACGCCCGAA CCGCGCTGCA CACGCATCAG GCCGCGTGCA CGGCGGCCAC GCAGGCGCTG
GCGCAGGAAC TCGCCGCGCT CGGTCAGCCG GTCGATGGCG CGCGGCTGGC CGTGCTGATG
ATCCAGGCCG AAACGCACCT GAAAGCGGCC GACGAGATGC GCGGCCAGCG CCGCACCTTG
TCGCAGCAGA TGACCGACGC CGAGGCCAAG ATCGCCGGCC TGACCGACGA CGCCGTGCAG
GCCGCCACGG CGCTCGACCA GTGGCAGCAG GCCTGGACCG AGACCATCAC GCAGACCGGC
CTGGCCCGCC ACGCCGACCC GCAGGTGGCC GATGCCGCGC TCGACACCGC CGAGCAGATC
GACACCGCGC TGGCCGCGAT GCAGCGCATC CGCACCGAAC GCATCGACAA GATGCACGCC
GATCTCGACC TGCACGCCCA GGCCGCGCGC GCGCTGGCCG AGCGCGTGGC GCCCGACCTG
GCGGCGGCTG CGGCGGCCGA CATCGCGCTG GCGCTGCGTG CCCGGCTGGA CGCGGCCAAC
GAGGCGCATC AGGAGGCGAG CCGGCAGAAA TCGGCGATCG AGGCGGCGCA GCGCAAGCTG
AGTGAGTCGA CCGCTCGCCG CAACCAGGCC CAGGCGACGC TGACGCCACT GCTGGCGCGG
GCCGGCTGCG CGACGAACGC CGAACTCGCC GATGCGATCG ACAAGAGCGA CCGGCGGCGC
GCGCTGTCGA TCGAGATCGC CACCGCGCAG AAGGCCGCCG AGTCAGGCGC CGACGGCCTG
ACGCTGGCGC AACTGAGCGC CGAGGCCGCC GGCGCCGAGG TCGATACGCT GATCGCCGAG
CTGGCCGACC TCAAGGCGCA GGACGAGGCC CTCGTCAACC GGCTGACCGA GCTGGCCGCG
ACACGGCTGG CAGCGGCGAC CGCGCTCGGT GCCATCGGCG GTACCGCCGC AGCGGCGCAG
GCCGAGGCGC AGCGTCAGGA GGCGCTGGCG CAGATGGCCG ATGCGGTCGA GCGCTACATC
AAGGTGCACA CCGCGGCGCG GCTGCTGAAG TGGTCGATCG AGCGCTACCG CGACGCCAAG
CAGGGCCCGA TGCTGTCGGC CGCCAGCGGC CTGTTCGCGC GGCTGACGCT GGGCTCGTTC
GAGCGGTTGT CGGTGGATTT CGAGCGCGAA CCGCTCAAGC TGCAGGGCCG CCGCCCGGAC
GGCGCGATGG TCGACATCGA CGGCATGAGC GAGGGCACCC GCGACCAGCT CTACCTGGCG
CTGCGCCTGG CCGCGCTCGA GATGCACCTG GGCCAGGCCC ACGTGCTGCC CTTCATCGCC
GACGACCTGT TCATCAACTA CGACGACCGC CGCTCCCGCG CCGGCCTGGA GGCGCTGGGC
CAACTCTCGC GTCAGACCCA GGTGCTGTTC CTGACCCACC ACGACCACCT GCTGCCGATG
ATCCGCGAGG TGTTCGGCGG GACGGTCAAT GTGGTGGAGC TGGGTTGA
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| Protein sequence | MRIDQLDLVR YGKFTDRSIA LPRAERDFHV IVGPNEAGKS TVRTAVLDLL YGIPMRTTHA
FAHAMSDMRL GARIEHDART LAFHRTKGNK QTLRSPADAV LPDNVLAPFL GSTDRDFFAQ
MFGLDHGRLI KGGHDILSAS NDLGQILFQS AAGIGSLGAV RAALEAEADK LWAKRRSNDR
AYYIAADALD RATAALKSAT VRTKDWAEAQ AKVTALDVAH EDTRRQHAEV RSRRNQIERM
RRVTPHLNAL ADARARLAEL GPGVELPDNA ARTLQDAERV MHVAQAEIDH QTGVLTEAQV
ALDAVQVDHR IRELATEITE LDDQRLQYRA YPGDIARREA EMDAQWRIAA DLAAGLGWDA
AGAEALRAAI PVASVRASLR RLIRAHAGLR QSCDMAVRAE KLKRAELAQA RAVLAGLASA
EAAPGLQAAL GQAQKLGDFT AVERERELAV RKCEQALADA GAALGAWRVE IGPLRAMAVP
AADTVRALAQ EQLADDAQAR AVATRIQALT RQLDAAQLEV THYRQAHEPV TRDEVVSARL
QRLSAWSEIK IRPQELAQRA EGFERLVESA DALADRRHDT VQQAEALIGK QAQVERLAQE
RASVQAEADA LAAAREARAR RWSDLTAACG LPSQPPLPFD AAGPWLEARS ATLAAWDRLE
DARTALHTHQ AACTAATQAL AQELAALGQP VDGARLAVLM IQAETHLKAA DEMRGQRRTL
SQQMTDAEAK IAGLTDDAVQ AATALDQWQQ AWTETITQTG LARHADPQVA DAALDTAEQI
DTALAAMQRI RTERIDKMHA DLDLHAQAAR ALAERVAPDL AAAAAADIAL ALRARLDAAN
EAHQEASRQK SAIEAAQRKL SESTARRNQA QATLTPLLAR AGCATNAELA DAIDKSDRRR
ALSIEIATAQ KAAESGADGL TLAQLSAEAA GAEVDTLIAE LADLKAQDEA LVNRLTELAA
TRLAAATALG AIGGTAAAAQ AEAQRQEALA QMADAVERYI KVHTAARLLK WSIERYRDAK
QGPMLSAASG LFARLTLGSF ERLSVDFERE PLKLQGRRPD GAMVDIDGMS EGTRDQLYLA
LRLAALEMHL GQAHVLPFIA DDLFINYDDR RSRAGLEALG QLSRQTQVLF LTHHDHLLPM
IREVFGGTVN VVELG
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