| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1546 |
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| Symbol | |
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| ID | 6161593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1641673 |
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| End bp | 1642416 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664301 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_001790579 |
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| Protein GI | 171058230 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.433871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAC TGCACCTTTT CCATTTCTCA GCGCCATCGC GCTTCTATGC GCTCACCGGC
GCCCTGCTGC CCTGGCTGTG GACCGCCGCG GCGCTGCTGG CGGCCGCCGG CCTGTACATC
GGTTTCGTGA TCGCCCCGAC CGACGCCACC CAGGGCGAGG TCTATCGCGT CATCTTCATC
CACGTGCCGA CCGCCTGGGT GTCGATGGTG CTGTACCTGG CGATGGCGTT CTGGGCTGCG
ATCGGCTGGG CCTTCAACGC GCGCATGGGC TCGATGCTCG CGCGTGCCAT CGCCCCGACC
GGCGCGCTGT TCACCTTCAT GGCGCTGTGG ACCGGCGCCC TGTGGGGCAA GCCGACCTGG
GGCACCTGGT GGGTCTGGGA CGCGCGGCTG ACGTCCGAGT TCATCCTGCT GCTGCTCTAC
CTCGGCTACA TGGCGCTGGT GGCGGCGATC GACGACACCC GCCGTGCCGA CCGGGCCGGT
GCACTGCTGG CGGTGGTGGG CGCGGTCAAC GTGCCGATCA TCTATTTCTC GGTGAAGTGG
TGGAACACCC TGCACCAGGG CGCGTCGGTC AGCCTGACCG CCGCACCCAA GATGGCCGAG
ACCATGCTCA ACGCGATGCT GCTGATGAGC CTGGCCTGCT GGGCCTACGC GTTCGCGATG
GTCTTCATGC GCACCCGGGC CATCATCCTC GAGCGCGAGC GCGAGACCGC CTGGGTGGGC
GAACTGGCCG GGAGGCCGAC ATGA
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| Protein sequence | MKKLHLFHFS APSRFYALTG ALLPWLWTAA ALLAAAGLYI GFVIAPTDAT QGEVYRVIFI
HVPTAWVSMV LYLAMAFWAA IGWAFNARMG SMLARAIAPT GALFTFMALW TGALWGKPTW
GTWWVWDARL TSEFILLLLY LGYMALVAAI DDTRRADRAG ALLAVVGAVN VPIIYFSVKW
WNTLHQGASV SLTAAPKMAE TMLNAMLLMS LACWAYAFAM VFMRTRAIIL ERERETAWVG
ELAGRPT
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