| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1507 |
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| Symbol | |
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| ID | 6161397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1591487 |
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| End bp | 1593799 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664262 |
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| Product | NADH-quinone oxidoreductase, chain G |
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| Protein accession | YP_001790540 |
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| Protein GI | 171058191 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
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| TIGRFAM ID | [TIGR01973] NADH-quinone oxidoreductase, chain G |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00792374 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGAAA TCGAACTCGA CGGCAAGAAG GTCTCGGTCA ACGAAGGCAG CATGGTGATG
CATGCGGCCG AAGCGGCCGG CACCTACATC CCGCATTTCT GCTACCACAA GAAGCTCTCG
ATCGCGGCCA ACTGCCGCAT GTGCCTGGTC GACGTCGAGA AGGCGCCCAA GCCGATGCCG
GCCTGCGCCA CTCCGGTGAC GCAGGGCATG ATCGTGCGCA CCAAGAGCGA CAAGGCGCTG
AAGGCGCAGC AGTCGGTGAT GGAGTTCCTG CTCATCAATC ACCCGCTCGA CTGCCCGATC
TGCGACCAGG GCGGCGAATG CCAGTTGCAG GATCTGGCCG TGGGCTACGG CAAGTCGGCC
TCGCGCTACG AAGAAGAAAA GCGCGTGGTC TTCCATAAAG AGGTCGGCCC GCTGATCTCG
ATGGAAGAGA TGAGCCGTTG CATCCATTGC ACCCGCTGCG TGCGCTTCGG CCAGGAAGTG
GCCGGCCAGA TGGAACTGGG CATGATCCAT CGCGGCGAGC ACTCCGAGAT CACCACGGTG
GTCGGCGAGA CGATCGACTC CGAGCTGTCG GGCAACATGA TCGACATCTG CCCGGTCGGT
GCGCTCACCA GCAAGCCGTT CCGCTACAGC GCCCGCACCT GGGAACTGTC GCGCCGCAAG
AGCGTCAGCC CGCATGACAG CAACGGCGCC AACCTCGTGG TGCAGGTCAA GAACCACCAG
GTCCTGCGCG TGGTGCCGTT CGAGAACGAC GCCGTCAACG AATGCTGGAT CGCCGACCGC
GACCGCTTCA GCTACGAAGC CTTCAACAGC GACGCCCGCA ACACGACGCC CATGCTCAAG
CAGGGCGGCC AGTGGAAGGC GGTCGACTGG ACCTCGGCGC TCGAATACGT CGCCAAGGGT
CTGAAGGGCA TCGCCGCACA ACACGGCAAT GCCTCGATCG GCGCGCTGGC GTCGGCCTGT
TCCACCAGCG AAGAGCTCTA CCTGCTCGGC CAGCTGGTGC GTGGCCTGGG CAGCGACAAC
ATCGATCACC GCCTGCGTCA CGCCGACTTC CGACAGGACG CCGGTGCGGT GCGCTGGCTC
GGTACTTCGA TCGCGAGCCT GTCGACGCTC GATCGCGCGC TGGTCGTCGG CTCGTTCCTG
CGCAAGGATC ACCCGCTGTT CGCGCAGCGG CTGCGCCAGG CGGCGCGCCG CGGTGCGCAG
GTCACCCGCG TGCATGCGCT GGCCGACAAT TGGCTGATCA GCATCGCCGC CGAAGCCGTC
GGCGCGCCGA GCGAATGGGT CACGCTGCTG GGCGAGATCG CCAGTGCGAT CGCGGCAGCC
AAGGGCGTTG CCGCACCGTT CGCGCTGACC GCCGGCGCGC AGGCTCAGGC CATCGCGCAG
AGTCTGCTCG GTGGTGAACG CAAGGCCGTG CTGCTCGGCA ACGCCGCAGC GCAGCATCCG
CAAGCCGACG ATCTGCTGGC CTTGGCCAAC TGGATCGCAG AACAGACCGG CGCCAGCGTC
GGCTACCTGG GCGAAGCCGG CAACAGCGTC GGCGCCCAGC TGGTCGGTGC GCAGCCGCAG
CAAGGCGGCC TCGACGCCGG CCAGATGCTG GCCCAGCCGC GCAAGGCCTA TCTGCTGTTC
AACACCGAGC CGGTGCTGGA CGCGGCCAAC GCAGCCCGTG CCGCCAAGGC GCTGGCCGCC
GCCGACATGG TGGTGGCGTT CAGCCCCTTC AGCGCCAACC TCGAACACGC CGACGTGCTG
CTGCCGATCG CGCCGTTCAC CGAGACCGGT GGCAGCTTCG TCAATGCCGA CGGCCGCGTG
CAGAGCTTCC ACGGCGTCGT GCGTCCGCTG GGCGACACCC GTCCGGGCTG GAAGGTGCTG
CGCGTGCTCG GCAACCTGCT GGGCCTGCCG GGCTTCACGC AGGAGACGGT CGAGGAAGTG
CGTGCCCAGG CTTACGGCGA TGTCGCCACG ATCCCGGCCC GTCTGTCCAA CCGCACCCGC
ACGCTGGCGC GCACGGCGGC CACGCCGCAG GGTCTGCAGC GTCTGGCCGA CGTGCCCATC
TACGCCACCG ATTCGACGGT GCGCCGCGCC CCGGCGCTGC AGCGCACGGC CGATGCCGCC
GCATCCGTGG TCAGCGTGCC GTCCGAGCTG TGGGGCCGGC TCGGCCTCGT GGCGGGCGCC
TCGCTGCGCA TCACGCAAGA CGGTGCCTCG GTGACCTTGC CGGCTCAGCT CGATGCCAGC
CTGGCCGCCA ACACCGTGCG CGTGAGCGCG GCGCTTTCCG CCACCGCAGT CCTGGGTGAC
GCCTTCGGCA CCCTTGCCGT CGAACCCGCC TGA
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| Protein sequence | MIEIELDGKK VSVNEGSMVM HAAEAAGTYI PHFCYHKKLS IAANCRMCLV DVEKAPKPMP
ACATPVTQGM IVRTKSDKAL KAQQSVMEFL LINHPLDCPI CDQGGECQLQ DLAVGYGKSA
SRYEEEKRVV FHKEVGPLIS MEEMSRCIHC TRCVRFGQEV AGQMELGMIH RGEHSEITTV
VGETIDSELS GNMIDICPVG ALTSKPFRYS ARTWELSRRK SVSPHDSNGA NLVVQVKNHQ
VLRVVPFEND AVNECWIADR DRFSYEAFNS DARNTTPMLK QGGQWKAVDW TSALEYVAKG
LKGIAAQHGN ASIGALASAC STSEELYLLG QLVRGLGSDN IDHRLRHADF RQDAGAVRWL
GTSIASLSTL DRALVVGSFL RKDHPLFAQR LRQAARRGAQ VTRVHALADN WLISIAAEAV
GAPSEWVTLL GEIASAIAAA KGVAAPFALT AGAQAQAIAQ SLLGGERKAV LLGNAAAQHP
QADDLLALAN WIAEQTGASV GYLGEAGNSV GAQLVGAQPQ QGGLDAGQML AQPRKAYLLF
NTEPVLDAAN AARAAKALAA ADMVVAFSPF SANLEHADVL LPIAPFTETG GSFVNADGRV
QSFHGVVRPL GDTRPGWKVL RVLGNLLGLP GFTQETVEEV RAQAYGDVAT IPARLSNRTR
TLARTAATPQ GLQRLADVPI YATDSTVRRA PALQRTADAA ASVVSVPSEL WGRLGLVAGA
SLRITQDGAS VTLPAQLDAS LAANTVRVSA ALSATAVLGD AFGTLAVEPA
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