Gene Lcho_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1428 
Symbol 
ID6160220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1508550 
End bp1509140 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content62% 
IMG OID641664182 
Producthypothetical protein 
Protein accessionYP_001790461 
Protein GI171058112 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA TCGACCAAAC CGCACTCGGC CGCCTCGAGG CCGAAGGCCG CCTGCTCAAC 
AGCGTGCTGA AGGGTCCGAC CCGGAAGGCC GGACGCATCG GCTTTCGTGG TGATATCGCC 
TTGAAGTTCG CAGCCAAGCG CGCCGACGAA GCACGCCCGC CCGAAGTCAG CAGCGACCAG 
GTGATTGCCG CCGCGCAGGA AGGCGAATCG CACATCGCCT TCCTGAGCGC GTTCCTGCTC 
AGCTTCGAGC ACCTGAAGAT GCTGGCCGAG GTGCTGGGCG ATGCGCTGTC GCCGAAGGGC 
AAGTACTTTC TCTTCTGCGA CAACATCGAC ATCTCCAAGC GCTACCAGGT CGAGTTCGGC 
GGCGCCAGCT TCTACATCCT GCCGATCGAC GAAGCGACGG TCTACAACGA GACGCTTGAA 
CTGCTCTATC TCGAGAAGAC CGAACTCAAG CGCCTCGACA CCGCCGGCAA GGTGGATGCG 
ATCGCCGACA AGGCCGCGGG TTTCAGCCAG AGCTTTCCGA AGATCAGCTA CGAAGAAGGC 
CTGGCCTTGA TGGGCCCGGT GCGCAACCTC TACGAAAACC GCCCCGTGTG A
 
Protein sequence
MTTIDQTALG RLEAEGRLLN SVLKGPTRKA GRIGFRGDIA LKFAAKRADE ARPPEVSSDQ 
VIAAAQEGES HIAFLSAFLL SFEHLKMLAE VLGDALSPKG KYFLFCDNID ISKRYQVEFG 
GASFYILPID EATVYNETLE LLYLEKTELK RLDTAGKVDA IADKAAGFSQ SFPKISYEEG 
LALMGPVRNL YENRPV