| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1412 |
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| Symbol | |
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| ID | 6160053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1496086 |
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| End bp | 1497261 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664166 |
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| Product | aminotransferase class V |
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| Protein accession | YP_001790445 |
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| Protein GI | 171058096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGC CTGTCTATCT GGACCACAAC GCCACCACCC AGCCCGCGCC CGAGGTGATC
GAGGAGATGC TCGACAGCCT GCAGAAGGTC TGGGCCAATC CGTCGTCGAC CCACGCGCCC
GGGCAGGCTG CGCGCCGCGC GCTCACCGAT GCGCGCACCC GGGTGGCGCA GTTCCTCGGC
TGCCTCGGTG CCGAGCTGGT GTTCACCAGC GGCGCGACCG AAGCCAATCA CATCGCCGTG
CTCGGTGCGC TGGCGCAAGG GCGCGCCACC GGCCGCACGC GGCTGGTGAT GAGCGCGGTC
GAACACCCCG GCATGCTCGC GCTGGCCGAG CGCCTGAGAG GCGAGGGCGT GGTGGTCGAC
CTGATCGGCG TCGATGCCCG CGGCGTGCTT GATCTGCAGT GCGCCCGCCG CCTGATCGGC
GACGACGTGG CGCTGGTCAG CGTGATGGGC GCCAACAACG AGACCGGCGT GCTGATGCCG
GTGGCCGAGC TGGCCGCGCT GGCGCATGCG GCGGGCACGT TCGTGCATGT CGACGCCACC
CAGCTGGTCG GCAAGACGGC GGCGCGTTTC GATGCCGGCG GTGCTGACCT GTGGTCGGTG
TCGGCCCACA AGCTGCACGG GCCCAAGGGC GTCGGCGCGC TGGTGGTGCG CAAGGGCCTG
AACTGGCCGG CGCTGTTCGC CGGCCGGCAG GAACGCCACC GCCGCGGCGG CACCGAGAAC
CTGCCGGGGA TCGTCGGTTT TGCCGCCGCG GCCGAACGCA CGGCCCGCAC GCTGGCTCAC
GACATGAGCC ACATGCGCGA CCTGCAGGGC CGGCTCGAAT CCGGCCTGCG CGCGGCCCTG
CCCGGTGTGC ATCTGTACGG CACCGGCGCT GATCGCCTGC CCAACACCAG CTGCCTGCGC
TTCGGCACGC TCGACGCCGA ACAGGTGCTC GGCAAGCTCG AGCGCGCCGG CGTGTTCGCG
TCCTCCGGCG CGGCCTGCAC GGCCAGCGGC ACGCAGCCTT CGCATGTGCT GCTGGCGATG
GGTGAGCCGG CCTTGCATGC CCGCGCCAGC GTGCGTTTCT CGCTCGGCCG CGACACCACC
GCGGCCGAGA TCGACCAGAC CCTTGCGGCG GCCGTGCGCG CCCTCGGTCC CTTGCTGCAC
ACCGTGCCCG CGCCCGCCGA GGCGCTGGCG GCGTGA
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| Protein sequence | MNPPVYLDHN ATTQPAPEVI EEMLDSLQKV WANPSSTHAP GQAARRALTD ARTRVAQFLG
CLGAELVFTS GATEANHIAV LGALAQGRAT GRTRLVMSAV EHPGMLALAE RLRGEGVVVD
LIGVDARGVL DLQCARRLIG DDVALVSVMG ANNETGVLMP VAELAALAHA AGTFVHVDAT
QLVGKTAARF DAGGADLWSV SAHKLHGPKG VGALVVRKGL NWPALFAGRQ ERHRRGGTEN
LPGIVGFAAA AERTARTLAH DMSHMRDLQG RLESGLRAAL PGVHLYGTGA DRLPNTSCLR
FGTLDAEQVL GKLERAGVFA SSGAACTASG TQPSHVLLAM GEPALHARAS VRFSLGRDTT
AAEIDQTLAA AVRALGPLLH TVPAPAEALA A
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