| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1398 |
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| Symbol | |
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| ID | 6159923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1485237 |
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| End bp | 1486499 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664152 |
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| Product | glutamine--scyllo-inositol transaminase |
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| Protein accession | YP_001790431 |
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| Protein GI | 171058082 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCCAT TCCTCGATCT GAAAGCGCAG TACCTGTCGA TCAAGGACGA GGTGGATGCG
GCGATCCAGG GCGTGCTCGA CAGCTGCCAG TTCACGCTGG GCAGCGAGGT CGCGGCCTTC
GAAAGCGAGT TCGCTGCCTA TTGCGAAGCC GCCCACGGCA TCGGCGTCAA CACCGGCACC
AGCGCGCTGC ATCTGGCGCT GCTGGCTGCC GGCGTCGGCG CGGGTGACGA GGTGATCACG
GTGCCGTTCA CGTTCGTCGC CACGGTGTCG GCGGTCGACT ACACCGGCGC CCGGCCGGTG
TTCGTCGACA TCGATCCGCG CAGCTTCACG ATCGACGTCA CGGCGATCGA GGCCGCGATC
ACGCCGCGCA CCCGGGCGAT CATTCCGGTG CACCTGTACG GGCAGCCGGC CGACATGGAT
CCGATCCTGG CGATCGCACG GCGCCACGGC CTGGTGGTCA TCGAGGATGC CTGCCAGGCC
CACGGCGCGA CGTACAAGGG CCGGCGCACC GGCAGCATGG GTGACCTGGC CTGCTTCAGC
TTCTACCCGG GCAAGAACCT GGGCGCCTGC GGCGAGGCTG GCATGGTGGT CACGAACGAC
CCGGCGCTTG CGCACACCCT GCGCATGCTG CGCGACTGGG GCGCCGAGAA GAAATATCAC
CACGTGCTCA GGGGCTACAA CTTCCGCATG GAAGGCATTC AGGGGGCCGT GCTGAGGGTC
AAGCTGCGCC GCCTGGAGGC CTGGACCGAA GCGCGGCGCG GTGTCGCCGC CCTCTACGAC
CGGCTGCTGG CCGGCAGCGG CATCGCCACG CCCGAGGCGA TGCCCTGGGC CCGCCACGTC
CATCACATCT ACGCCGTGCG CACGGGCCAT CGGCAGGCGT GGCAGGAGGC GCTGCTGGCA
CAAGGCATCC AGACCGGCAT CCACTACCCG ACGCCCGTGC ATCTGCTGCC GGCGTTTGCC
GACCTGGGTT ATCGCGCCGG TCAGTTCCCG CATGCGGAGC AGGCCGCGCG CGAGGTGCTG
TCGCTGCCGA TGTATCCGGA GATCACGCCG CATCAATGCG CGGAGGTGGC CCGTTCGCTG
CGCGACCTCG CCGCGGCGGA TGCGGCCATT GCGCCGCTCA GAGCCGATCG AAGGGATAGA
CGTAGTGCCA GGGAAACGCG GCTGCCAGAC GCTGCCGACC CAGCTGACGA AACGCCTGTT
CATCGCGCAG CGCCATCACG TAGGTTCGAT AGCCCGCCTC CCGTGCGCCC CACTTCTGCT
TGA
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| Protein sequence | MTPFLDLKAQ YLSIKDEVDA AIQGVLDSCQ FTLGSEVAAF ESEFAAYCEA AHGIGVNTGT
SALHLALLAA GVGAGDEVIT VPFTFVATVS AVDYTGARPV FVDIDPRSFT IDVTAIEAAI
TPRTRAIIPV HLYGQPADMD PILAIARRHG LVVIEDACQA HGATYKGRRT GSMGDLACFS
FYPGKNLGAC GEAGMVVTND PALAHTLRML RDWGAEKKYH HVLRGYNFRM EGIQGAVLRV
KLRRLEAWTE ARRGVAALYD RLLAGSGIAT PEAMPWARHV HHIYAVRTGH RQAWQEALLA
QGIQTGIHYP TPVHLLPAFA DLGYRAGQFP HAEQAAREVL SLPMYPEITP HQCAEVARSL
RDLAAADAAI APLRADRRDR RSARETRLPD AADPADETPV HRAAPSRRFD SPPPVRPTSA
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