| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1390 |
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| Symbol | |
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| ID | 6160304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1475511 |
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| End bp | 1476419 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664144 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001790423 |
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| Protein GI | 171058074 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCA CGCCGACCAT CGCGCCTTTC GTGATCATCA CGCCGGCGCA CAACGAAGAA
GCGCTGATCG AGCAGACGCT CGAATCGATG GTGGCGCAGA CCGTGCGGCC GCTCAAGTGG
GTCGTCGTCA GCGACAACTC GACCGACCGC ACGGCCGAGA TCGTGCGCCG ATACGCGGCG
CAGCACGACT TCATGCAGCT GCTCGAGATC CGGCGTGACG GCACGCGGCA CTTCGGCAAC
AAGGTCCATG CCTTCAATGC CGGACTGGCC GAGGTGGGCG CTCTCGACTA CCGCTACATC
GGCAACCTGG ACGCCGACAT CTCGCTGCCG AGTCACTACT TCGAATCGCT GCTGGGCGAA
CTCGACAGCG ACCCGAGCCT GGGCCTGGCC GGTGGCATGG TGGCGACCCG GATCGGCGAT
CGCTTCGTGA GCCAGAACGT CGCGCCCGAC AGCGTCGCCG GGGCGGTGCA GCTGTTCCGG
CGGGCCTGCT TCGAGCAGAT CGGCGGCTAT CTCGCCCTGC CCGAAGGTGG CATCGATTCG
GCGGCCGAGA TCATGGCGCG CATGAAGGGC TGGAAGGTCC GCACCTTCGC GGCCTTGCAG
GTGCTGGAGC ATCGCCGCAC CGGCACCGCA TCCGCACCGC CGGTGGCCGC CAAGGTGCGG
GAGGGTCAGC GGCTGCAGTC GCTCGGCTAC GGCCTGCTGT TCCTGTGCCT GCGCTGCATC
TATCGCTCGA TGGATCCGCC GCGCCTGATC GGCAGCGCCG CCACCTTGCT GGGTTACGTC
CAGCGCCGGC TCAGCGGTGC GCCGGTGGTG CTGCCGGCGG AGGTCGTGAG CTTCCTGAAG
ACCGAGCAGC AACACAAGCT GCTGAACTCG CTGCGAGGTG CGCATGTGCG GCATCAGCGC
CCTCTTTGA
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| Protein sequence | MNGTPTIAPF VIITPAHNEE ALIEQTLESM VAQTVRPLKW VVVSDNSTDR TAEIVRRYAA
QHDFMQLLEI RRDGTRHFGN KVHAFNAGLA EVGALDYRYI GNLDADISLP SHYFESLLGE
LDSDPSLGLA GGMVATRIGD RFVSQNVAPD SVAGAVQLFR RACFEQIGGY LALPEGGIDS
AAEIMARMKG WKVRTFAALQ VLEHRRTGTA SAPPVAAKVR EGQRLQSLGY GLLFLCLRCI
YRSMDPPRLI GSAATLLGYV QRRLSGAPVV LPAEVVSFLK TEQQHKLLNS LRGAHVRHQR
PL
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