| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1389 |
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| Symbol | |
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| ID | 6160303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1473659 |
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| End bp | 1475536 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641664143 |
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| Product | asparagine synthase (glutamine-hydrolyzing) |
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| Protein accession | YP_001790422 |
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| Protein GI | 171058073 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGCA TCAGCGCCCT CTTTGACCGC AGCGGACAGC CCGTCGATCG GGCCATCCTC
GAGCGCATGA CGGCCTCGCT GACGCACCGC GGGCCGGACG GCGAGGGCTA TTTTCTCGAC
CGCGAGATCG GCCTCGGCCA TCGGCGCCTG AGCATCATCG ACGTCGCCGG CGGAGCGCAG
CCGATCGGCA ATGAAGACGC CTCGATCCAG GTCGTCTTCA ATGGCGAGAT CTACAACTTC
ATCGAGCTGC GCGCCGAACT GATCAAGTGC GGGCATTGCT TCAGGAGCGT CTGCGACACC
GAAGTCATCG TGCATGCCTA CGAACAATGG GGCACGGATT GCGTGAAGCA CTTCAACGGC
ATGTTCGCGT TCGTGCTCTT CGATGCATCG GACCGCTCGG TCTTTCTGGC GCGCGACCCG
CTGGGCATCA AGCCGCTCTA TGTCGCGCGG GTCGGCGAGC AGCTGCTGTT CGGTTCCGAG
ATCGGCGCCC TGCTCCAGCA TCCCGGGCTG CGCCGCGAGA TCGACCTCGA CGCACTGGCG
CAGCTGTTCA CCTTCCGCTT CGTGCCCTCG CCCAAGACCT TGTTCAAGGG CATCGTCAAG
CTGCAGCCCG GTCATTGGAT GCGGGTCACG CACAAGGATG TCGAGGTGCA ACGCTACTGG
AACCGCATCC CGGTCCAGCG CACGAGCTGG CGCGAAAACG ATCTGATCGA GCAATACCAG
GCCTTGCTGG AAGACGCCGT GCGCCTGCAG ATGCGCAGCG ACGTTCCGGT CGGCCTGTTC
CTGAGTTCAG GGGTCGATTC CGGCGCGCTG CTGGCGATCA TGAGCACCTA CGCGAGCGGG
CCGGTGCAGA CCTTCACCAT CGGCTTCGAA GGCGGCGAGA GAACCAACGA GGTCGACGAC
GCCCGTCAGA CCGCGCGCCA GTTCGGCGCC GAACATCACT CGATGATGCT GAGCCACCGC
GACTACATCG GCTACTTCGA GCGCTACATG CGCGACCTGG AGGAACCGGT CGCCCATGAG
CCCGCGCCGG CGTTCTATTT CCTGGCGCAG ATGACGAGTT CGCACGTCAA GGTGGCCTTG
ACCGGGCAAG GCGCCGACGA GCCCTGGGCC GGCTACGACC GCTACCTGGG CGTCAAGCTC
TCGGGTGCCT ACAGCCGCTT GCCGCAGCGC CTGACCGGCC AGATCGCCCG CCTGGTCGAG
CACCTGCCGC TGCCGCTGGA GCGCCTCAAG CGCGGCGTGG CGTCGCTGGG CGAGCGCGAC
GTCCTGACCC GCTTCACGAA GATCTATTCG TTCTTCAGCG CCGACATGAA GGCGCAGCTC
TACACCGGCG CACTCAAGGC CGGCTTCGAG CGCTCGCGCT ACGGCACGCG CGATGCGCTG
CGCCCGCTGC AGAGCGACGT CGATCATCTC GACCCGCTCT CGCAGATGCT CTACATCGAC
ACCCGCGCCA ACCTGCCCGA CGACCTGCTG ATGGTGGCCG ACAAGACCTC GATGGCCAAC
TCGCTGGAGG TGCGCGTGCC CTTCCTGGAC CATCGCCTGG TCGAGTTCAT CGAGAGCCTG
CCGCCGCAAC TCAAGCTCAA GGGGCTGAGC GGCAAGTACC TGCACAAGAA GGCGATGACG
CGCTGGCTGC CGCCGCAGAC GGTCTATCGG CAGAAGAAGG GCTTTGCACA CCCGGTGGCC
GACTGGCTGC GCGGGCCGAT GAAACCGATG GTCGACGACT GCCTGCTCGG CAGCGATTCG
CACATGGGGC GTTATTTCGA CCAGGGCTAC ATCCGCCAGA TGATCCGGCG CCATCAGCAA
GGCAGCGAGC CGTTCATGCG CCACCTTTAT CTGCTGGTGT CGCTGGAACT GTGGCACCGC
ACCTTCATCC AGGCATGA
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| Protein sequence | MCGISALFDR SGQPVDRAIL ERMTASLTHR GPDGEGYFLD REIGLGHRRL SIIDVAGGAQ
PIGNEDASIQ VVFNGEIYNF IELRAELIKC GHCFRSVCDT EVIVHAYEQW GTDCVKHFNG
MFAFVLFDAS DRSVFLARDP LGIKPLYVAR VGEQLLFGSE IGALLQHPGL RREIDLDALA
QLFTFRFVPS PKTLFKGIVK LQPGHWMRVT HKDVEVQRYW NRIPVQRTSW RENDLIEQYQ
ALLEDAVRLQ MRSDVPVGLF LSSGVDSGAL LAIMSTYASG PVQTFTIGFE GGERTNEVDD
ARQTARQFGA EHHSMMLSHR DYIGYFERYM RDLEEPVAHE PAPAFYFLAQ MTSSHVKVAL
TGQGADEPWA GYDRYLGVKL SGAYSRLPQR LTGQIARLVE HLPLPLERLK RGVASLGERD
VLTRFTKIYS FFSADMKAQL YTGALKAGFE RSRYGTRDAL RPLQSDVDHL DPLSQMLYID
TRANLPDDLL MVADKTSMAN SLEVRVPFLD HRLVEFIESL PPQLKLKGLS GKYLHKKAMT
RWLPPQTVYR QKKGFAHPVA DWLRGPMKPM VDDCLLGSDS HMGRYFDQGY IRQMIRRHQQ
GSEPFMRHLY LLVSLELWHR TFIQA
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