Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1377 |
Symbol | |
ID | 6159759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1460509 |
End bp | 1461411 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641664131 |
Product | exopolysaccharide tyrosine-protein kinase |
Protein accession | YP_001790410 |
Protein GI | 171058061 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0489] ATPases involved in chromosome partitioning |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family [TIGR03029] chain length determinant protein tyrosine kinase EpsG |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCA TGCCCGCCAC GCCCCGATTG ATGGCCGTCG AGTCCGGCCT GCAGGCCAGG CCGCACCCGG ATCGCCGGCT CGGCGGCATC CTGGCCGCGC AAGGCAAGCT CGACCCCGCG GGCATCGAGC GCGTGCTCGA GCTGCAGCAC CGCGAGGGCA GCCGTTTCGG CGCGGCGGCG CTGCATCTCA AGCTGATCAC GGTCGAGGAT CTGGTCCACG CCATCACGGC GCAATACGAC CTGCCGCACC TGCGCCCCGA CAACCGGCGC ATCAGCCTCG AACTGGTCAC GGCCTTCGAG CCCTTCCATG CCTGCGCCGA GCAGATGCGG GCCCTGCGCT CGCAGCTGCT GCAGCGCTGG CCGGCCGAAG ACGGGCAGGC GCACAGCCTG GCCATCGTCA GCCCGGCCCG CGGCGACGGC CGCAGCTACC TGGCGGCGAA CCTGGCGGTC GCGTTCGCGC AACTGGGCTG CCGCACCCTG CTGATCGACG CCGACCTGCG CTGGCCGCGC CAGCATCTGA TCTTCGACGT GTCCGATCGC ATCGGCCTGT CGACCGTGCT GAGCGCCCGC TCGGACGACC GCGCCGCCGT GACGGCGCTG CCCGCGTTCG GGCCGCTGCA CCTGCTGCCG GCGGGCGACT GCCCGCCCAA TCCGCTGGAC CTGCTCTCGC GCGAGGCCTG GCCCGCCCTG CTGCAGGTGC TGCGGCCGGC CTTCGACGTG ATCCTGATCG ACACGCCGGC GGCCGAGTTC TGCGCCGATG CGCTGGGCGT GGCGCGCCGC GCCGGCCATG CCCTGGTCGT CGCCCGCAAG GACGGCACGC GCCTGAGCAG CACCACCGAG CTGATCAGCC AGCTGCACGA CGAAGGCACG CGCGTGATGG GCACCGTCCT GAACGCCCCG TGA
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Protein sequence | MSAMPATPRL MAVESGLQAR PHPDRRLGGI LAAQGKLDPA GIERVLELQH REGSRFGAAA LHLKLITVED LVHAITAQYD LPHLRPDNRR ISLELVTAFE PFHACAEQMR ALRSQLLQRW PAEDGQAHSL AIVSPARGDG RSYLAANLAV AFAQLGCRTL LIDADLRWPR QHLIFDVSDR IGLSTVLSAR SDDRAAVTAL PAFGPLHLLP AGDCPPNPLD LLSREAWPAL LQVLRPAFDV ILIDTPAAEF CADALGVARR AGHALVVARK DGTRLSSTTE LISQLHDEGT RVMGTVLNAP
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