| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1373 |
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| Symbol | |
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| ID | 6159991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1456593 |
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| End bp | 1457390 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664127 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001790406 |
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| Protein GI | 171058057 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCTT CCATTCTCGT GATCGAAGAC GATGCGGCAG CCCGCGAGCT GCTGGCCGGC
AACCTGCGCC ATGCGGGCTA CACGGTGTCG TGCGCGAGCG ATCTGGGCGA AGCCAGGGCT
CGCACGAAGG AGACGCGCCC GGATCTCGTC CTGCTCGACC GCATGGTCGC CGGTGGCCAC
GCGCTGTCCT ATGCGCGCCA GCTGCGTGGC GACCAGCGTA CCTCGGGCAT CGCCATCATC
GTCATCGGCG CCGATGCGCC GCAGGCGCAC GACACGGTGG CTGCGCTGGA GAGCGGCGCC
GACGATTGCG TGTGCAAGTC GGTTTCGGTC AGCGAGGTGC TGGCGCGCAT CCGGGCCGTG
ATGCGCCGCA GCGCGCCGCA GTGTGGCGAT CAGGCGCTGG AGATCTCCGG CCTGCGTTTC
GATCCGGCCG CGCGGCGCGT CACGGCGCTC GGCCGCGACA TCGAGCTGTG CGCCATCGAA
TACCGGCTGC TGCATTTCTT CATGACCCAC CCCGACCGGA TCCTGGGCCG CAGCCAGCTG
CTCGACCAGG TCTGGGGCGA CCATGTCTGC GTCGAGGAGC GTGCGGTCGA CATCCATGTG
CGGCGCCTGC GCCGGGCGCT CGAGCCGAGC GGGCATGCCG CGCTGATCGA GACCATCCGT
GGCATGGGCT ATCGATTCCG CCGCGAAGAG GTCACCGAGG TGGCGCAGCG TCGCCTGCTG
CGTCCGGTGC CGATGCCCCA TGCCGCCTAC CTGGGCGTCG GCGACCGACG CCGGGCGCAG
CGCCGCAGCA CCCAATAG
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| Protein sequence | MDASILVIED DAAARELLAG NLRHAGYTVS CASDLGEARA RTKETRPDLV LLDRMVAGGH
ALSYARQLRG DQRTSGIAII VIGADAPQAH DTVAALESGA DDCVCKSVSV SEVLARIRAV
MRRSAPQCGD QALEISGLRF DPAARRVTAL GRDIELCAIE YRLLHFFMTH PDRILGRSQL
LDQVWGDHVC VEERAVDIHV RRLRRALEPS GHAALIETIR GMGYRFRREE VTEVAQRRLL
RPVPMPHAAY LGVGDRRRAQ RRSTQ
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