Gene Lcho_1364 details

Gene Information

• Locus tag: Lcho_1364
• ID: 6159770
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 1446635
• End bp: 1448545
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641664118
• Product: Fe-S protein assembly chaperone HscA
• Protein accession: YP_001790397
• Protein GI: 171058048
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCACTGC TGCAAATCGC CGAACCCGGC CGCGCGGCGG CGCCGCACCA GCATCGGCTG 
GCGGTCGGCA TCGATCTGGG TACCACCAAC TCGCTGGTGG CCACGCTGCG CAGCGGTCTG 
CCCACGGTGC TGGCCGACGA GGCCGGGCGT TGCCTGCTGC CGTCGGTGGT GCATTACGCC 
GCCGATGGCG AGGTGCTGGT GGGCGACGCC GCCTGCGCGC TGGCACTCGG CGATCCGCAG 
AACACCATCG CCTCGGCCAA GCGCCTGATC GGCCGCTCGC CGGTCGACAT CGGCCCCGGC 
ACCGTGCCTT ATGCGCTCAC GCCGATGGGG CCGAGCGCGG TGGGCGTGGC CACCCGAGCC 
GGCCTGAAGA GCCCGGTCGA GATCGGCGCC GAGGTGCTGC GCACGCTCAG GAGCCGCGCC 
GAGGCCTCGC TGGGTGGCGC GCTGGTGGGC GCGGTGATCA CCGTGCCGGC CTACTTCGAT 
GACGCCCAGC GCCAGGCCAC CAAGGACGCC GCGCAGCGCG CCGGCATCAC CGTGCTGCGC 
CTTCTCAACG AGCCCACCGC CGCCGCGGTG GCCTACGGCC TGGACACCGC CAACGAGGGC 
GTCTACGGCG TCTACGACCT CGGCGGCGGC ACCTTCGACG TGTCGATCCT GCGGCTCGCG 
CGCGGCGTGT TCGAGGTGCT GTCGACCAAC GGCGACGCGA TGCTGGGCGG CGACGATTTC 
GACGCCTGTC TGGTGCGCTG GTTCTGCAAC CAGGACCCGC TGTTCGAATG GAGCGAGCGC 
GATGCCGCCG CCCTGAACGC CGCGGCGCGC AGCGCCAAGG AGGCGATGAG CAGCCAGGCC 
GAAGTGACGA TGCGTTGCCA GCGCCACGAC GGTGCCACGC AGATCGCCCG GCTGACGCGC 
GAGGTCTTCG AGGCGCAGAC GCAGGCGCTG GTGGCCCGCA CGATCGCGCC GGTCAAGCGC 
GCGCTGCGCG ACGCCGGGCT GAAGGCCGGC GAGGTCGACG GCATCGTGCT GGTCGGCGGT 
TCGACCCGCA TGCTGCACGT GCGCCGCGCG GTGGCGGATT TTTTCGGCCG CGAGCCCTAC 
ACCAACATCG ACCCCGACCA GGCCGTGGCG CTGGGTGCGG CGATCCAGGC CGATCAACTG 
GCCGGCAACC GCGCCGCCGG TGACAACGGC CTGCTGCTGC TCGACGTCAA TCCGTTGTCG 
CTCGGGCTGG AGACGATGGG CGGCCTGGTC GAGAAGATCG TGCCGCGCAA CACCACCGTG 
CCGACCGCCC GTGCGCAGGA CTTCACCACC TTCAAGGACG GCCAGACCGC GATGGCCATC 
CACGTGGTGC AGGGCGAACG TGAACTGGTG AGCGAATGCC GCTCGCTGGC GCGCTTCACG 
CTGCGCGGCA TTCCGCCGAT GGTTGCGGGC GCGGCGCGCA TCCGCGTCAC CTTCCAGATC 
GATGCCGACG GCCTGCTGTC GGTGAGTGCG AGCGAGCAGG TCAGCGGCGT GCAGGCGCAT 
GTCGAGGTCA AGCCGAGTTA CGGCCTGGCC AGCGACACCG TGGCACACAT GCTGCGCAGC 
GCGATCAGCA GCGCCGATGC CGATGCCGCC GCACGCATGC TGCGCGAGGC CGAGGTCGAC 
GCGCGCCGGC TGCTCGATGC GGTCGATGCG GCCATCAGCG TCGACGAGGC GCTGCTGCGG 
CCCAAGGAGC AGTTCCAGAT CCTGCGCGCG ATGCAGGACG TGGCCGATCT GCTCGAAGAG 
TGCGCCGAAA ACGAAGGCGG CACGCGGGAG CTGCAGAAGG ACATGCGCGA GAACCTGCGC 
CGCGCCACCG AAGGCCTGAA TGCGGCCACC ACCGCGTTTG CCGGGCGCCG CATGGACGCC 
CGCGTGCGCA GCGCGCTGAG CGGGCGCACG CTCGATCAGA TCGCCGTCTG A 

 

Protein sequence

MALLQIAEPG RAAAPHQHRL AVGIDLGTTN SLVATLRSGL PTVLADEAGR CLLPSVVHYA 
ADGEVLVGDA ACALALGDPQ NTIASAKRLI GRSPVDIGPG TVPYALTPMG PSAVGVATRA 
GLKSPVEIGA EVLRTLRSRA EASLGGALVG AVITVPAYFD DAQRQATKDA AQRAGITVLR 
LLNEPTAAAV AYGLDTANEG VYGVYDLGGG TFDVSILRLA RGVFEVLSTN GDAMLGGDDF 
DACLVRWFCN QDPLFEWSER DAAALNAAAR SAKEAMSSQA EVTMRCQRHD GATQIARLTR 
EVFEAQTQAL VARTIAPVKR ALRDAGLKAG EVDGIVLVGG STRMLHVRRA VADFFGREPY 
TNIDPDQAVA LGAAIQADQL AGNRAAGDNG LLLLDVNPLS LGLETMGGLV EKIVPRNTTV 
PTARAQDFTT FKDGQTAMAI HVVQGERELV SECRSLARFT LRGIPPMVAG AARIRVTFQI 
DADGLLSVSA SEQVSGVQAH VEVKPSYGLA SDTVAHMLRS AISSADADAA ARMLREAEVD 
ARRLLDAVDA AISVDEALLR PKEQFQILRA MQDVADLLEE CAENEGGTRE LQKDMRENLR 
RATEGLNAAT TAFAGRRMDA RVRSALSGRT LDQIAV