| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1349 |
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| Symbol | |
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| ID | 6161374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1436046 |
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| End bp | 1436987 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664103 |
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| Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
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| Protein accession | YP_001790382 |
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| Protein GI | 171058033 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAC TTCTCTGGCT GCAGACCGGC TCGTGTGGCG GCGACTCGCT GGCCATCCTG
AGCGCCGACT CGCCCAGCCT CGAACAGCTG CTCGACAGCT ATTCGATCGA GCTGCTGTGG
CACCCCTCGC TTTCGAACGG GCATGCCCGG CGGCTCGACC GGGTCATCGA CCAGATCCTG
GCCGGCGAGC AGGCGCTCGA CATCCTGTGC GTCGAAGGCA GCATCATCAC CGGGCCGCGT
GGCACCGGGC TCTACGACCC GTGGCGCGGC GGCGCCAAGA TGAACCTCGT GCGCGACCTG
GCCGCCAAGG CCGGCGCCGT GGTGGCGATG GGCACCTGCG CCGCGTACGG CGGCATCCAC
GCGGCGCCGC CGAACCCGTC GGACTGCACC GGCCTGCAGT TCGACCACGA ACAGCCCGGC
GGGCTGCTCG GGCCGGGCTG GCGCTCGCGC AGCGGCATGC CGGTGATCAA CGTGGCCGGC
TGCCCGGCCC ATCCGCACGC GATGACGCAG ACCCTGGCAG CGCTGGCGGC CGGCCTGCCG
CTCGAGCTGG ACGCGATCCA TCGCCCGGTT TCGCACTTCA GCACCATGGT GCACCAGGGC
TGCACGCGCA ACGAATACCA CGAGTACAAC ATCGAGGACA GCACGCCCGG CGGCAAGGCC
TGCATGTTCT TCAACCTCGG TTGCCAGGGG CCGCTGACAC GCGCGGTCTG CAACACCGAC
CTCTGGAACG GCGTGAGCAG CAAGACCCGC GCAGGCGTGC CGTGTTTCGG CTGCACCTCG
CCGAACTTCC CGCACGACGG CGACCTGTTC AGCACCGAGA AGATCGGCGA CGTGCCGATC
CGGCTGCCGC TGGGGGTGGA GCGGCCGCGC TACATGGCCT ACAAGAACCT GGCGCGTTCG
GCCGCCCCGC CGCGGGTGCG CAACAAGAAG ATGGAACCTT GA
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| Protein sequence | MATLLWLQTG SCGGDSLAIL SADSPSLEQL LDSYSIELLW HPSLSNGHAR RLDRVIDQIL
AGEQALDILC VEGSIITGPR GTGLYDPWRG GAKMNLVRDL AAKAGAVVAM GTCAAYGGIH
AAPPNPSDCT GLQFDHEQPG GLLGPGWRSR SGMPVINVAG CPAHPHAMTQ TLAALAAGLP
LELDAIHRPV SHFSTMVHQG CTRNEYHEYN IEDSTPGGKA CMFFNLGCQG PLTRAVCNTD
LWNGVSSKTR AGVPCFGCTS PNFPHDGDLF STEKIGDVPI RLPLGVERPR YMAYKNLARS
AAPPRVRNKK MEP
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