Gene Lcho_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1322 
Symbol 
ID6163054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1408613 
End bp1409332 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content75% 
IMG OID641664076 
Productputative cytochrome c 
Protein accessionYP_001790355 
Protein GI171058006 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAC TGCCAACGGC CCTGCGCTGG CTGACCGCGC TGGCCGCGTC CAGCGTTGCA 
CAGGCCGCCG AACCGCCCGC CTATCCGTTG ACCGTGCCCG ACACGCTGGC CCAGCGTGCG 
CTGGCCTGCA CCGGCTGCCA CGGCCCGCAA GGCCGCGCCA CACCGGACGG CTATGTGCCG 
CGCATCGCCG GCAAGCCGGC CGGCTATCTG CACCAGCAGC TGCTGAACTT CCGCGACGGC 
CGGCGCCGGC ACGAGGGCAT GGCCCGGCTG CTGGCGCCGC TGAGCGACGA CTACCTGGGG 
GCGCTGGCGG GGCACTTCGC GTCGCTGGAC CTGCCGCATG TCGCCACCCC GCCCGCACCG 
CGGGGCAGCG CGGCGTCGAT GGCACGGGGC CGCCAGTTGA TGGATCAGGG CGACGCCACA 
CGCGATCTGC CCGCCTGCAC GCGCTGTCAC GGCCGCGAAT TGACGGGCGT CGCACCGGCC 
ATTCCCGGGC TGCTCGGCCT GCCGCGCGAC TACGTGATCG CGCAGTTCGG CGCCTGGCGC 
AACGGCACGC GCCAGGCCCG CTCACCCGAC TGCATGGCGA CGCTGGCCCA GCGTCTGCCG 
CAGCAGGACA TCGTCGCCGT GGCCGACTGG CTGGCGGCCC AGCCGCTGCC GGCCGACACG 
CGCCCCGCGC AAGCCTTGCC GCAGGCGCTG CCGATGCGCT GCGGCAGCGT GTCGCCATGA
 
Protein sequence
MIRLPTALRW LTALAASSVA QAAEPPAYPL TVPDTLAQRA LACTGCHGPQ GRATPDGYVP 
RIAGKPAGYL HQQLLNFRDG RRRHEGMARL LAPLSDDYLG ALAGHFASLD LPHVATPPAP 
RGSAASMARG RQLMDQGDAT RDLPACTRCH GRELTGVAPA IPGLLGLPRD YVIAQFGAWR 
NGTRQARSPD CMATLAQRLP QQDIVAVADW LAAQPLPADT RPAQALPQAL PMRCGSVSP