Gene Lcho_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1276 
Symbol 
ID6162528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1360833 
End bp1361222 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content69% 
IMG OID641664030 
ProductDNA polymerase beta subunit 
Protein accessionYP_001790310 
Protein GI171057961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000156571 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGACG CGCTGCTGCC CGCGCTGCGC AACGCGTTCC CCGACGCGCT GGCCTTCTAC 
GCTTTCGGCA GCCGCGTGCA AGGAACGGCG CGGGCCGACA GCGATCTGGA CCTGGCCGTG
CTGGTGCCCG GTTATGCCGA CCCGCTGGCG CTGTGGTCGC TGGCCGCCGA CCTGTCGGCG
CAAGCCGGCT GCGATGTCGA TCTGCTGGAC CTTCGTGCGG CCAGCACGGT GATGCAGTAC
CAGGTGCTGA CCACCGGCGA AAGGCTCTGG GCCCAGGAGC CCGACGCCGG CCTGTTCGAG
TGCTACGTGA TGAGCGAGAA GCTCGAACTC GATCAGGCGC GTGCCGGGCT GCTGGCCGAC
ATCACCCGCG AGGGCCGCGT GCATGGCTGA
 
Protein sequence
MIDALLPALR NAFPDALAFY AFGSRVQGTA RADSDLDLAV LVPGYADPLA LWSLAADLSA 
QAGCDVDLLD LRAASTVMQY QVLTTGERLW AQEPDAGLFE CYVMSEKLEL DQARAGLLAD
ITREGRVHG