| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1233 |
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| Symbol | |
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| ID | 6163957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1319925 |
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| End bp | 1320794 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663987 |
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| Product | integral membrane protein |
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| Protein accession | YP_001790267 |
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| Protein GI | 171057918 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5473] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAG CAAACTCGAT CGGCACCGCC ACCCTGATGG CGGGCATCGA CGATCCCGCG
CAGCCGCCCG AGCCCGGCCG CGACCCGGCC GGCACGCCCC CCGCGCAGCC GGCCAGCCCG
CCGTCGCGCA GCCGCTACGA GCTCAACACG CTGAGCTGGG GCGACCCGCT GCGCTGGCTG
ATGCTGGGCT GGCGCGACTA CCTGCGCCAC CCCGGCATCG GCACCTTCTA CGGCGCGTGT
TTCGTGGCGA TGGGCTGGGC GCTGATGACG GTGTTCGAGC ACGCGCCGGC CTGGACGCTG
GCGCTGTCGG GCGGTTTCCT GCTGGTCGGG CCGTTCATGT GCATGGGCAT GTACCAGGTC
AGCCAGCGGC TCGAACGCGG CGAACGGCCC GACCTGGGCG ACTCGCTCAC CGCCTGGGAC
GAGCACATCG GCCAGATGGC GATCTTCGGC TTCGTGCTGC TGGTGCTGGA GATGGTCTGG
GCCCGCTCGA CGCTGGTGAT CTTCGCGCTC AGCTTCGACG GCATGCCCGA CTTCAAGGGC
TCGCTGATGG CGCTGTTCAA CCCCGAGAAC ATCGAGTTCA TCATCGCCTG GATGGCGGTC
GGCTCGGCGT TCGCGGTGAT CATCTTCTCG GTCAGCGTGG TCAGCATCCC GATGATGCTC
GACGCCCAGG TCGACGCCAT CACCGCCGGC CTGACCAGCC TGCGCCTGGT GCTGACGCAG
ACCGGCGTGC TGCTGTTCTG GGGCGCGCTG ATCACGGCGC TGGTGGCGCT GGCGATGCTG
CCGTGGTTCG CCGGGCTGAT GGTGGTCGGG CCGGTGCTCG GCCACGCCAG CTGGCACGCC
TACCGCGCCG CGGTGACCCG CATCGACTGA
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| Protein sequence | MTPANSIGTA TLMAGIDDPA QPPEPGRDPA GTPPAQPASP PSRSRYELNT LSWGDPLRWL
MLGWRDYLRH PGIGTFYGAC FVAMGWALMT VFEHAPAWTL ALSGGFLLVG PFMCMGMYQV
SQRLERGERP DLGDSLTAWD EHIGQMAIFG FVLLVLEMVW ARSTLVIFAL SFDGMPDFKG
SLMALFNPEN IEFIIAWMAV GSAFAVIIFS VSVVSIPMML DAQVDAITAG LTSLRLVLTQ
TGVLLFWGAL ITALVALAML PWFAGLMVVG PVLGHASWHA YRAAVTRID
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