| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1215 |
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| Symbol | |
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| ID | 6163848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1300941 |
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| End bp | 1302047 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663969 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001790249 |
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| Protein GI | 171057900 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCATC AGATGGCTTT CCCTACCCCG GTGTCCGTTC ATGAAAGCGA GTCGTCCGTG
AATCCACTCA GCCCCAAGAT GCCCGTCGCG GTGATCGGCG CCGGCGCCAT CGGCCGCATG
CACATCGAGC GCCTGCTGCG CCACGCCGAT GTCAGCCTGG CCGCTGTCGC CGATCCGACC
GACGCCGCCC GCGCCCTGGC CGCCGAACTC GGCGTGCCGT GTTTTGCCGA TCCGCGCGAG
ATGCTCGATC AGGTCCGGCT CGGCGGCGTG ATCGTCGCCA CGCCGAACTC GACGCACGCC
GACATCGGCA TCGCCTGCAT CGAGCGCGGC CTGCCGGTGC TGATGGAAAA GCCGGTGGCC
GACACGGTGG CCGATGCGCA GCGCCTGTGC GATCGGGCCG CAGCGGCGGG CGTGCCGCTG
ATGGTCGGCC ACCAGCGCCG CCACAACCCG ATCCTGCGCC GCGCCCGCGC ACTGATCGCC
GACGGTCTGC TCGGCCGGCC GGTGAGCGCC AACGTGATGG CGACCTGGCT CAAGCCCGAC
AGCTACTACC AGCTCGCCTG GCGCCGCCAG GCCGGCGGCG GGCCGGTGCT GATCAACCTG
ATCCACGACA TCGACGTGCT GCGCTTCCTG CTCGGCGAGA TCGAGTCGGT GCAGGCCGTC
ACGTCGAACG CGGTGCGCGG CTTCGAGGTG GAGGACAGCG CCGCCGTGCT GCTGCGTTTT
GCCAGCGGCG CGCTCGGCAC GCTGGTGGTT TCCGATGCCG CGGTGGCGCC GTGGAACTGG
GATCTGGCCG CGGGCGAGGC GGCGCACTAC GTGCAGCAGG CGGTCGATTC GCACTTCATC
GCCGGCACCG AGGCCTCCCT GACCTTGCCG CGCCTGAACG TGTGGCGCTA CCGCGGCGCG
CGCGGCTGGC ACGAGCCGCT GACGCAGGAG CGCAGCGCCG TGCACGCCGG TGATCCCTAC
ATCGAGCAGT TGCGCCACTT CCGCGCCGTG GCCGAGGGCC GCGAGACGCC GCTGTGTTCG
GGCCTCGACG GCCTGCGCAC GCTGCAGGCG ACGCTGGCGG TGCACGAAGC CGCGCGCAGC
CAACGCCCGG TGAACCTGGC CGCCTGA
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| Protein sequence | MFHQMAFPTP VSVHESESSV NPLSPKMPVA VIGAGAIGRM HIERLLRHAD VSLAAVADPT
DAARALAAEL GVPCFADPRE MLDQVRLGGV IVATPNSTHA DIGIACIERG LPVLMEKPVA
DTVADAQRLC DRAAAAGVPL MVGHQRRHNP ILRRARALIA DGLLGRPVSA NVMATWLKPD
SYYQLAWRRQ AGGGPVLINL IHDIDVLRFL LGEIESVQAV TSNAVRGFEV EDSAAVLLRF
ASGALGTLVV SDAAVAPWNW DLAAGEAAHY VQQAVDSHFI AGTEASLTLP RLNVWRYRGA
RGWHEPLTQE RSAVHAGDPY IEQLRHFRAV AEGRETPLCS GLDGLRTLQA TLAVHEAARS
QRPVNLAA
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