| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1207 |
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| Symbol | |
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| ID | 6161157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1293388 |
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| End bp | 1294086 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663961 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790241 |
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| Protein GI | 171057892 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC TTTTGGCACT CGACAAGGTC AACGCCTTCT ACGGCGCCGC CCACATCCTG
CACGGCCTGA GCCTGCACGT GAACGAGGGC GAACGGGTCG CGCTGATCGG CCGCAACGGC
GTCGGCAAGA CCACGGTGGT CAACACCATC CTCGGTCTGG CCAGCCTGCG CGGCGGCGAC
ATTCGCCTGC GTGACTACGC GCTGACCAAG CCGCGCACCT ACATCGCCGC GCAGCACGGC
ATCGTGGTGG TGCCGCAGGG TCGGCGCATC GTCGCCAACC TGACGGTCGA AGAGAACCTG
CAGCTCGGTG CAGCGACCGG CCGCAAGGGC CACTGGACCG TGCCGCGCAT CTACGAGCTG
TTCCCGATCC TGCAGGAGCG CGCGCACACG CCGGGCACGG CGCTGTCGGG TGGCCAGCAG
CAGATGCTGG CGGTCGGCCG CGCGCTGATG GCCAACCCGG CGCTGATCCT GCTCGACGAG
CCCACCGAAG GACTGGCGCC GGTGATCGTC GACCAGCTCG GCCGCATCTT CAACCAGGTG
GCCGCGCAGG GCACGGCGCT GCTGCTGATC GAACAGAACA TGACGCTGGT GGCGCGCGTG
GCCGAGCGCT TCTGCGCCAT GGCCAAGGGC GCCGTGGTCG CCGAAGGCCG CGTGCACGAA
GGCAGCCTCG ACGAGCTGCA CCGCCACGTG ATGGTTTGA
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| Protein sequence | MKTLLALDKV NAFYGAAHIL HGLSLHVNEG ERVALIGRNG VGKTTVVNTI LGLASLRGGD
IRLRDYALTK PRTYIAAQHG IVVVPQGRRI VANLTVEENL QLGAATGRKG HWTVPRIYEL
FPILQERAHT PGTALSGGQQ QMLAVGRALM ANPALILLDE PTEGLAPVIV DQLGRIFNQV
AAQGTALLLI EQNMTLVARV AERFCAMAKG AVVAEGRVHE GSLDELHRHV MV
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