| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1206 |
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| Symbol | |
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| ID | 6161156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1292672 |
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| End bp | 1293391 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663960 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790240 |
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| Protein GI | 171057891 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAT ACGTATTGCA GACCGAGGAC GTCGCCATCC ACTATGGCGG CGTCAAGGCG
GTCGACGGCG TGGCGATGAC GCTCGAACGC GGCCAGATCC GCGGCCTGAT CGGCCCCAAC
GGGGCGGGCA AGTCGACCGT GATCGACGCC ATCACCGGAC GGCGCCGCCT GACCCGCGGC
AAGGTGGTGC TGGGTGGCCA GGACGTGAGC GCGCTCGGCG TGGTCGAGCG CCGCCAGCGC
GGCCTGTCGC GCTCGTTCCA GCGCACCAGC ATCTTTGCGC AGATGCCGGT GCGCAAGCAG
GTCGAGCTGG CCTCCTGGAA GATGGGCATG GCCGACCCCG GCGCCGATGC CGACGACGTG
CTGCGCGAGC TGTCGCTGCA CACGATGTCT GACGTGATTG CCGCCGATCT CGGCTACGGC
GAGCAGCGCC GCCTCGACCT CGCCATCGCG CTGGTCGGCA GCCCCACCGT GCTGCTGCTC
GACGAGCCGA TGGCGGGGCT GTCGGTCAAG GAATCGCTCG ACCTGGCGCA GCACCTGAAG
GCGCTGACCT CGCGCCGCAA CGTCTCGGTG CTGCTGGTCG AACACGACAT GGACGTGGTG
TTCGGCATCT CCGATGTCGT CACCGTGTTC GAACTCGGCC GCGTCATCGC GGCCGGCTCA
CCCGCCGAAG TGCGCAGCAA TCCGCGTGTG CGCGAGGCTT ATCTCGGGAG CGCGGCATGA
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| Protein sequence | MAEYVLQTED VAIHYGGVKA VDGVAMTLER GQIRGLIGPN GAGKSTVIDA ITGRRRLTRG
KVVLGGQDVS ALGVVERRQR GLSRSFQRTS IFAQMPVRKQ VELASWKMGM ADPGADADDV
LRELSLHTMS DVIAADLGYG EQRRLDLAIA LVGSPTVLLL DEPMAGLSVK ESLDLAQHLK
ALTSRRNVSV LLVEHDMDVV FGISDVVTVF ELGRVIAAGS PAEVRSNPRV REAYLGSAA
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